Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g4205 ATGGCCATGGCCGGAGCTACCCTCTGTCCTCAGAGCATCACCGGAGCAATGGTGAGCTCAAGCAGCAACACCACCACCACCAAGAAGAGAATGACCAAAGCCATTCACGTGAGAGGCCTCAACTCATTCGGTGGACTGAAAGCCACCAACGATGTGATCTCCATGGGTCTTCCTTCCAGCACCGAGCATTGCTTTGCTAAGATTGTGAGCTCAGTGAAGGCGACCTCATCATCAACCGGAAGAGGAAAGCGTGGTGGAGCACTCTCGTCGACATGCAATGCTGCCGGTGAGATATTCACCATTGCAGCAATCATAAACGGACTTACTCTCGTTGGGGTTGCAGTTGGGTTTGTGCTTCTTCGGATTGAAGCGTGGGAAGAGGAACAGAGTGAAGGTTGA 399 0.5238 MAMAGATLCPQSITGAMVSSSSNTTTTKKRMTKAIHVRGLNSFGGLKATNDVISMGLPSSTEHCFAKIVSSVKATSSSTGRGKRGGALSSTCNAAGEIFTIAAIINGLTLVGVAVGFVLLRIEAWEEEQSEG* 133
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g4205 132 Hamap Cytochrome b6-f complex subunit 7 [petM]. 94 125 IPR012595 GO:0009512
Lja1g4205 132 SUPERFAMILY PetM subunit of the cytochrome b6f complex 95 125 - -
Lja1g4205 132 PANTHER B6F COMPLEX SUBUNIT, PUTATIVE, EXPRESSED-RELATED 1 129 - -
Lja1g4205 132 Pfam PetM family of cytochrome b6f complex subunit 7 96 123 IPR012595 GO:0009512
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g4205 - - lja:Lj1g3v1625450.1 245.358
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja1g4205 1 53719590 53720262 Lja1g4205 1 53719590 53720262 ECH