Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g4198 ATGGGAATCTGCAGAGATATGGAAAACAATCCAAGGCGGCAAAGAAGGCTAGGAGGAAACAGAGCTGCACTTTTTGTATATGCTATGGAGGGGCTGGAGAACATGGCCTTTGTTGCCAATGCAGTGAGTCTAGTAACATACTTCTTTGGGTACATGAACTTCAGCTTAACAAAATCTGCCACAACCCTGACCAACTATATGGGAACTGCATTTTTACTAGCACTGATTGGAGGGTTTATCTGTGATACCTATCTATCTAGGTTCAAGACTTGTGTTCTGTTTGCATGCATGGAATTGTTGGGATATGGTCTCCTCACAGTTCAGGCACACTTCCATCAGTTAAGACCTGTCCCCTGCAAAGATGTAGCAACAACCCAGATGAGCCAATGTAAACCTGCAACAGGCGGCCAAGCTGCAATACTTTACACTGGCCTATACCTTGTTGCATTAGGAACCAGTGGTGTTAAGGCAGCTTTACCAGCCTTAGGGGCTGACCAGTTCGATGATAAAAATCCGAAGGAGGCATCTCAATTGTCAAGCTTTTTCAACTGGTTCTTGCTTAGCCTCACCATAGGGGCAATAGTTGGGGTTACATTCATTGTTTGGATCAGCACCAACCAAGGATGGTATTGGAGCTTTACTATGTCCACTATAGCAGTCTTGTTTGCAATTATTTCCATATGCATGGGCAAGTCATTGTATCGAAACAATAAACCAAAGGGAAGCCCTCTAGTTCGAATCATACAGGTATTTGTAGCAGCATTCAAAAACAGAAAACTTCCAATTCCAGAGAATGAAGCCCAACTACATGAGATTCATGAGAAAGAAAGAGATGACAGCTATGAAATCCTTAAAAAGACAGATCAATTCAGATTCTTGGACCATGCAGCAATTGTTAGAAGCAGTGCAGGTGCAACAACATCCATATCCTGGGGAACCTGGAATCTGTGCACCGTGACACAAGTAGAAGAAACAAAAATCCTAATCCGCATGCTACCAATAATATTCAGTACCATATTCATGAATACATGTTTGGCTCAGCTTCAAACTTTCTCTATACAACAAAGCACCACCATGAACACCAAAATCATGGGGTTTAAAGTGCCAGGACCCTCTGTTCCAGTCATTCCCCTGTTATTCATGTTTTTCCTGATCCCTTTATATGACCGCTTTTTCGTCCCACTTGCTCGAAGAATCACAGGGATTCCCACTGGAATTCGACACCTTCAGCGGATTGGAGTTGGATTGGTTCTCTCAGCTATTTCCATGGCAGTTGCTGGTTTTGTTGAGACACGACGCAAGTCTGTCGCCGTCCAACACAACATGGTAGATAGCACAGAGCCTCTACCAATGAGCGTGTTTTGGCTGGGTTTCCAATATGCTATCTTTGGAGCCGCAGACATGTTTACCCTTATTGGCCTTCTGGAGTTTTTCTATGCAGAAAGTTCAGCTGGGATGAAGTCACTGAGCACTGCAATCTCTTGGTGTTCTGTGGCGTTCGGTTACTTTACTAGTACCGTGGTCGTTGTGGTGGTTAACAGAGTGAGTGGAGGGTGGTTGGCAAGTAATAACTTGAATAGAGACAAGCTCAACTACTTCTACTGGTTGTTGTCTGTGATAAGCGTTGTGAACTTTGGATTTTACTTGGTGTGTGCTTCTTGGTATAAATACAAAACGGTGGAAGACAAGCAAGGCGATTCAAAGGATAATGTTGACATTGCCAAGGTTTAG 1731 0.4356 MGICRDMENNPRRQRRLGGNRAALFVYAMEGLENMAFVANAVSLVTYFFGYMNFSLTKSATTLTNYMGTAFLLALIGGFICDTYLSRFKTCVLFACMELLGYGLLTVQAHFHQLRPVPCKDVATTQMSQCKPATGGQAAILYTGLYLVALGTSGVKAALPALGADQFDDKNPKEASQLSSFFNWFLLSLTIGAIVGVTFIVWISTNQGWYWSFTMSTIAVLFAIISICMGKSLYRNNKPKGSPLVRIIQVFVAAFKNRKLPIPENEAQLHEIHEKERDDSYEILKKTDQFRFLDHAAIVRSSAGATTSISWGTWNLCTVTQVEETKILIRMLPIIFSTIFMNTCLAQLQTFSIQQSTTMNTKIMGFKVPGPSVPVIPLLFMFFLIPLYDRFFVPLARRITGIPTGIRHLQRIGVGLVLSAISMAVAGFVETRRKSVAVQHNMVDSTEPLPMSVFWLGFQYAIFGAADMFTLIGLLEFFYAESSAGMKSLSTAISWCSVAFGYFTSTVVVVVVNRVSGGWLASNNLNRDKLNYFYWLLSVISVVNFGFYLVCASWYKYKTVEDKQGDSKDNVDIAKV* 577
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g4198 576 PANTHER OLIGOPEPTIDE TRANSPORTER-RELATED 12 564 IPR000109 GO:0016020|GO:0022857|GO:0055085
Lja1g4198 576 SUPERFAMILY MFS general substrate transporter 10 564 IPR036259 -
Lja1g4198 576 Gene3D MFS general substrate transporter like domains 3 564 IPR036259 -
Lja1g4198 576 Pfam POT family 88 516 IPR000109 GO:0016020|GO:0022857|GO:0055085
Lja1g4198 576 PANTHER PEPTIDE/NITRATE TRANSPORTER 12 564 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g4198 Lja-Chr1 53556482 53560011 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja1g4198 28 557 Organic Solute Cotransporters AT1G27040 45.709 4.95e-155 453
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g4198 K14638 - gmx:100805429 972.615
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja1g4198 1 53556482 53560011 Lja1g4198 1 53556482 53560011 ECH