Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g4197 ATGGATCTCCGAGAATCAATCGAAACCCAAACCGACGTTTCCCTCACCATCGCCAAACTCCTGTTCTCGAAACATTCCAAGGACAAGAACGCCGTGTTTTCTCCCTTGTCCCTTCACGTCGTGCTCAGCATCCTCGCCGCCGGTTCAGAGGGCCCCACACTCCACCAGCTTCTCACCTTCCTCCGATCCAACTCCACCGACCACCTCAACTCCTTCGCCTCTCAGCTCGTCTCCGTCGTGCTCTCCGATGCTTCTTCCGTAGGCGGCCCTCGTCTCTGTTTCGCCGACGGTGTTTGGGTTGAACAGTCTCTCACTCTGAACCCTTCCTTCAAACAACTCGTCACTGCTGATTACCACGCTGCTTTAGCCTCTGTTGATTTCCAAACTAAGGCTGTGGAAGTGGCCAATGAAGTTAATGCATGGGCTGAGAAAGAGACAAATGGTCTTGTCAAAGATCTTCTTCCTGCTGGGTCAGTTGATGCCTCAACCAGGCTCATCTTTGCAAATGCATTGTATTTCAAAGGTGCATGGACTGAGAAGTTTGATGCTTCAATGACTAAAGACTGTGATTTTCACCTTCTTGATGGCACCTCAGTCAAGGTTCCCTTCATGGTCAGCAAGAAGAAGCAGTTCATTGGTGCTTTTGATGGTTTCAAGGTTCTTGGTCTTCCTTATAAGCAGGGTGACGATAAGCGTCAGTTCTCCATGTACTTGTTTCTTCCGGATGCAAAAGATGGGCTGTCGGCTTTGATTGAGCAGGTGGCTTCGAAACTCGGGTTTCTGAAGCGAAATCTTCCTGCTCATAAAGTGGAAGTAGGCGACTTCAGGATTCCCCGATTCCAAATTTCGTTCGGGTTTGAAACTTCTGATGTTTTGAAGGAGCTGGGAGTGGTTTTGCCTTTCTCAAATGATGCACATTTGACAAAAATGGTGGACTCTTCTACTGTTGGTCAAGGCCTATATGTGTCCAACATATTTCACAAGTCTTTCATTGAAGTAAATGAAGAAGGCACTGAAGCTGCAGCAGCCAGTGCTGTAACTATAAAATTGAGGAGTTTGCAAGTACTGACGAGGGTAGATTTCGTAGCTGACCACCCCTTCTTGTTCGTGATCAGAGAAGATTTGACCGGAACAGTACTATTTACAGGGCAGGTGCTCAATCCACTTGCTGGGTGA 1176 0.4787 MDLRESIETQTDVSLTIAKLLFSKHSKDKNAVFSPLSLHVVLSILAAGSEGPTLHQLLTFLRSNSTDHLNSFASQLVSVVLSDASSVGGPRLCFADGVWVEQSLTLNPSFKQLVTADYHAALASVDFQTKAVEVANEVNAWAEKETNGLVKDLLPAGSVDASTRLIFANALYFKGAWTEKFDASMTKDCDFHLLDGTSVKVPFMVSKKKQFIGAFDGFKVLGLPYKQGDDKRQFSMYLFLPDAKDGLSALIEQVASKLGFLKRNLPAHKVEVGDFRIPRFQISFGFETSDVLKELGVVLPFSNDAHLTKMVDSSTVGQGLYVSNIFHKSFIEVNEEGTEAAAASAVTIKLRSLQVLTRVDFVADHPFLFVIREDLTGTVLFTGQVLNPLAG* 392
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g4197 391 CDD serpinP_plants 10 388 - -
Lja1g4197 391 PANTHER SERINE PROTEASE INHIBITOR, SERPIN 13 391 IPR000215 GO:0004867|GO:0005615
Lja1g4197 391 SMART serpin2 15 388 IPR023796 -
Lja1g4197 391 Pfam Serpin (serine protease inhibitor) 10 388 IPR023796 -
Lja1g4197 391 Gene3D Antithrombin, subunit I, domain 2 28 335 IPR042178 -
Lja1g4197 391 Gene3D - 177 383 IPR042185 -
Lja1g4197 391 PANTHER SERPIN-ZX-LIKE 13 391 - -
Lja1g4197 391 ProSitePatterns Serpins signature. 361 371 IPR023795 -
Lja1g4197 391 SUPERFAMILY Serpins 6 388 IPR036186 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g4197 Lja-Chr1 53550448 53552473 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g4197 K13963 - gmx:100775287 584.719
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja1g4197 1 53550448 53552473 Lja1g4197 1 53550448 53552473 ECH