Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g4192 ATGGGCGCAGAGGCACAAATTCACCGAAGCTTAATCAACAAAATCTACGCTCCACTCTCCATCGAGTTCCCTTTCGCATCGCCAATCCCTTCTTTACGAACAAATGAACTCGAACTCGTTCGAGGCGTTTTGCGAATGCTGCAAGGGTTTTCTGGTTCCCTTTTCTGTTGGGATCACACTGCACATGCTTTTCATGCCAAGAGCGGAATCTTCGTTACGCATCTCTCCCTCAAGAGCCTCAATTCCCTTCTCAGTCAATTCATCCACGCTGCTTCGTGTCTCCAATTGGTTCAGATTACGCTCAGTAAGGTTGAATCTGCTCCGCCCAAAGCTCCTCCCACTTTGATGGCGTTTTCCTCCTCCGCTTCCGCATGGCTTAAGCGGTTACGGGATATTGCATTGAAGGAGGAAATGAACATGAACATGAACAATGCAGATGGTCTAATCACTCCCACGTTGTTAGGATTGGCGAATTCTTTATCAAGTCTTTGCTCAGGTGCTGAGTTCCTGTTGCGAATAGTCAGTGAGGCCATTCCCGCGCTGTATTTTGAGTTTGGGGTGTCTGTGCCGGCAGCAGAACTGGCTGTTCACGTGCTTGACTATCTTCATAAGAAGCTTGATGAAATGTGTCTTGTGCAAGGTGGTGAGGAGGAAGCTTATCAGATGGTGCTTTATATGTACATGGGAAGCTTATTGCCATATATTGAGGGTCTGGATTCCTGGCTTTTTGAAGGAATACTTGATGATCCTTCTGATGAGATGTTCTTTTTTGCCAATAATGAAGTTTCAGTTGATGAGGCTGAGTTCTGGGAGAAGAGTTATTTATTAAGAATGCTACAACATAGTAAGTTAGTTGCTGAGTTCTCCACAAATTATGTTGGTGATTCTGTGCCAGCATCGAATGACAGAAAGGAAATGGGAAGGAGGGAATCCATCTCTTTATCTAGTACAATTAAAGGAAAAGAGCAGAGCATTAGAGACCGTCCAGCTTGTCCTTTTTTTATCAAGGATTTAGCTAAGTCAATAGTTTCTGCTGGAAAATCTTTGCAACTGATGCGCCACATCCCTAGTTCCTTACCAGTACGGAGCAAAGGAAGTAATTGTGAGATTGGAAATACCAGATACGTAAACTATGGTTTGTTTCCTTCTCAGAGAATGGCTGGGCTTACACTGTCGGAAATTTTTTCTGTATCACTAGCTGGACTTATTGGTCACGGTGACCATGTCTGTAAATACTTATGGCAAGATGACGGGGATGAATCTGTATCTGTTTCTTCCTTTATATCTCACATAAATGAGGAAAAAACAAGTAATGACAATATTGAAAATTTAACTGCTCCATCATACTTGGAGAAGATCTGGTATAAGTTCTTGACTGATACATTACTTGAGAAAAGATCATCTGATTTGAAACTAAAATATGAAGACACAAAAAATGACACAAGAGACCAGGGAGGGGTTAGAGTTGTTAAAGATGAATTGCTTCTCTTGAGATCATGCTTAGAAAATCCAGTAATTACCGTGTGTCAAACAAATCTTGGAAAGAAGAATAGAGATGCTCTGGAAGCGTTGAATTTATCTAAAAATTTCTGTTTGCCTTCTTTAAATGATGAGGATTTAAGAAAGGCTATATATGGTAAAGAAAGTACATCATTTTCTGATACTGAAGGAACAAACTATACTTTTGGTTTTCAGTATGGTGAATCTGAGTACATTTGCTCTCAGGATGAGAGAAAGCTGTTAGAAATGTTGTTTCCTTTTCCTACCATTTTGCCTTCGTTTCAGGATGATGTTCCTGTGTCAGAGCTCTTGCCTTTCCAGAGAAACAGCACTCTTCCTTCCCGCGTTCTTCGCTGGATGCAAAATGTTGACCTAAGAACTACCCCACTTCCTCTGGTTATTATGCAGTACTGTCTAACCATCTATATTCAGAAACAGGTGGATTATATTGGAGCGAATATGTTGTTAAAGTTGATGAATGATTGGAGGTTGATGGAAGAGCTTGCAGTGTTGCGTGCTATATACTTGCTTGGTTCAGGTGATTTGCTACAACACTTTTTGACAGTAATTTTCAATAAGTTAGATAAGGGTGAAGCATGGGACGATGACTTTGAATTAAACACAATATTACAGGAATCAATCAGAAATTCTGCTGATTGTATGCTGTTAAGTGCTCCAGATTCATTGGTAGTGTCCATAACAAAAAATCTTGCTGACAGTGTTGAGGAAGCTAGCACAGCCGGCATTGGTTTGAGTTCTCCTCACAAAAGTCATGTCAATAGTTTTGGAATTAATGGCCTTGATATGCTCAAATTCACATATAAGGTGCCTTGGCCTCTTGAGCTCATTGCAAACACAGAGGCAATTAAGAAGTACAATCAGGTGATGCGGTTCTTGTTGAAGGTCAAGCGTGCAAAATTTGTTTTAGATAAAGTGCGGAGATGGATGTGGAAGGGCAGGGGATCTACAGCAGATAACAGAAAATATCATTGGCTAGTGGAGCAGAAACTCCTTCATTTTGTGGATGCTTTTCACCAATATGTGATGGATCGGGTATATCACAGTGCATGGCGTGAACTATGTGAAGGTATGACTATGGCTAAATCACTGGATGAAGTCATTGAAGTCCATGGGGCTTACATTTTATCAATTCAACGGCAGTGTTTTGTGGTTCCTGATAAGCTGGGGGCTCTGATTGCCAGCCGAATTAACAGCATCCTTGGCTTAGCTTTAGACTTTTATAACATACAACAGACACTGAGTAGCGGTGGAGCTGTATCTGCAATCAAGGCAAGGTGTGAGATGGAAGTGGACCGGATAGAGAAACAGTTTGATGATTGCATTGCTTTCTTACTAAGGGTCTTATCTTTCAAACTAAATGTGGGTCATTTCCCTCATTTGGCTGATTTGGTTACCAGAATTAACTACAACTATTTCTACATGTCGGCTAGTGGGAATTTGATGACTGCTTCTAGCTCTGGAGGTGTTACTTCGAGATTGGGGAAGACCTAG 3012 0.412 MGAEAQIHRSLINKIYAPLSIEFPFASPIPSLRTNELELVRGVLRMLQGFSGSLFCWDHTAHAFHAKSGIFVTHLSLKSLNSLLSQFIHAASCLQLVQITLSKVESAPPKAPPTLMAFSSSASAWLKRLRDIALKEEMNMNMNNADGLITPTLLGLANSLSSLCSGAEFLLRIVSEAIPALYFEFGVSVPAAELAVHVLDYLHKKLDEMCLVQGGEEEAYQMVLYMYMGSLLPYIEGLDSWLFEGILDDPSDEMFFFANNEVSVDEAEFWEKSYLLRMLQHSKLVAEFSTNYVGDSVPASNDRKEMGRRESISLSSTIKGKEQSIRDRPACPFFIKDLAKSIVSAGKSLQLMRHIPSSLPVRSKGSNCEIGNTRYVNYGLFPSQRMAGLTLSEIFSVSLAGLIGHGDHVCKYLWQDDGDESVSVSSFISHINEEKTSNDNIENLTAPSYLEKIWYKFLTDTLLEKRSSDLKLKYEDTKNDTRDQGGVRVVKDELLLLRSCLENPVITVCQTNLGKKNRDALEALNLSKNFCLPSLNDEDLRKAIYGKESTSFSDTEGTNYTFGFQYGESEYICSQDERKLLEMLFPFPTILPSFQDDVPVSELLPFQRNSTLPSRVLRWMQNVDLRTTPLPLVIMQYCLTIYIQKQVDYIGANMLLKLMNDWRLMEELAVLRAIYLLGSGDLLQHFLTVIFNKLDKGEAWDDDFELNTILQESIRNSADCMLLSAPDSLVVSITKNLADSVEEASTAGIGLSSPHKSHVNSFGINGLDMLKFTYKVPWPLELIANTEAIKKYNQVMRFLLKVKRAKFVLDKVRRWMWKGRGSTADNRKYHWLVEQKLLHFVDAFHQYVMDRVYHSAWRELCEGMTMAKSLDEVIEVHGAYILSIQRQCFVVPDKLGALIASRINSILGLALDFYNIQQTLSSGGAVSAIKARCEMEVDRIEKQFDDCIAFLLRVLSFKLNVGHFPHLADLVTRINYNYFYMSASGNLMTASSSGGVTSRLGKT* 1004
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g4192 1003 Pfam Gamma tubulin complex component C-terminal 664 980 IPR040457 GO:0043015
Lja1g4192 1003 Gene3D - 664 979 IPR042241 -
Lja1g4192 1003 Pfam Gamma tubulin complex component N-terminal 40 367 IPR041470 -
Lja1g4192 1003 PANTHER GAMMA-TUBULIN COMPLEX COMPONENT 4 1000 - -
Lja1g4192 1003 PANTHER GAMMA TUBULIN COMPLEX PROTEIN 4 1000 IPR007259 GO:0000226|GO:0000922|GO:0005815|GO:0007020|GO:0043015
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja1g4192 30 711 Glycosyltransferase AT1G20570 50.778 0.0 605
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g4192 K16572 - gmx:100782299 1640.55
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja1g4192 1 53443214 53451947 Lja1g4192 1 53443214 53451947 ECH