Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g4184 ATGCCATCTGTGCATTCTAGTCCCTGCTACCCAATGGAAAACCCTGCAATAGCATCACTACTCCGCCACACAACAACAGCAGCAGCAACAACAACAGGGGGAAAACGAAGCAAATTCTCCACAGGAGGACTCTTAAAAATGTTCAAGCTTTTTCCCATGCTAACCTCAGGCTGCAAAATGGTTGCTTTGTTAGGAAGACCACGCAAGCCAATGCTCAAAGACAGCGCCACGACAGGAACAATCTTCGGCTTCCGCAAAGGGAGAGTGAGTTTAGCTATACAAGAAGATACTCGGCAAATGCCAATTTTCCTCATAGAGCTTCCAATGCTGACAAGCGCTCTGAACAAGGAAATGGCCTCTGATATAGTGAGGATCGCACTCGAGAGCGAGACGAAGAGCAATAAGAAGAAGGTGATGGAGGAGTTTGTGTGGGCAGTGTATTGCAATGGGAGGAAAGTTGGGTATTCTATAAGGAGGAAGCAGATGAGTGATGATGAGCTTCATGTTATGCAACATTTGAGAGGGGTTTCAATGGGAGCAGGGGTGCTTCCTAGTGATAATAAGGAAAGTAATTCAGATGGGGAAATGACCTATATGAGAGCAAGGTTTGAGAGGGTGATTGGTTCAAAGGATTCAGAAGCTTTGTATATGATTAATCCAGATGGTGCTCAAGGACCAGAATTGAGTATCTTCTTTGTTAGAGCTCACTAG 711 0.4515 MPSVHSSPCYPMENPAIASLLRHTTTAAATTTGGKRSKFSTGGLLKMFKLFPMLTSGCKMVALLGRPRKPMLKDSATTGTIFGFRKGRVSLAIQEDTRQMPIFLIELPMLTSALNKEMASDIVRIALESETKSNKKKVMEEFVWAVYCNGRKVGYSIRRKQMSDDELHVMQHLRGVSMGAGVLPSDNKESNSDGEMTYMRARFERVIGSKDSEALYMINPDGAQGPELSIFFVRAH* 237
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g4184 236 Pfam Protein of unknown function, DUF617 78 234 IPR006460 GO:0010274
Lja1g4184 236 PANTHER PROTEIN MIZU-KUSSEI 1 1 235 IPR006460 GO:0010274
Lja1g4184 236 PANTHER - 1 235 - -
Lja1g4184 236 TIGRFAM A_thal_3588: uncharacterized plant-specific domain TIGR01570 77 234 IPR006460 GO:0010274
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g4184 Lja-Chr1 53310617 53311699 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g4184 - - mtr:MTR_3g101300 400.979
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja1g4184 1 53310617 53311699 Lja1g4184 1 53310617 53311699 ECH