Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g4182 ATGAACACAAGCGTCAGGACAAGGAACCAGCCTAGGAAACCTCCAATGACACATGAAAAGGTAGAGATGCGGGCAAGCTTGCGAGAAGGCACAAGGAATATTGCAGCTAAAGGTGGAAGGACATCTAGCAAAGACAGAAAAATTGCTTTGCAACAAGATGTTGAAAGGTTGAAGAAGAAGCTTAGGGATGAGGAGAACATTCACAGGGCATTAGAGAGAGCTTTCAATAGGCCTTTGGGATCTCTGCCTCGTCTTCCTCCCTATCTCCCTCCTCATACACTAGGACTTGTAGCTGAAGTGGCAGTGCTGGAAGAAGAAATTGTTAGGCTTGAAGAGCAGGTCCTACAGTTCAAGCAGAACTTGTACCATGAACCTGTCTACATTTCAGCCTCTAAGATGAAACTCCAGCATTCAGCATCTGCGAAAATTGCAAACTCCAAAGATAGTCCAAAACTGAGTAAATTGAAGTCCATTTCCCAAATATTGGGTGGTGCTGCAACATCTACAACTAGGCCTTCACGTTCAACAACACTTCCTGAGGCTAAAGAACAAAAAGAGAATCAACCTTATACTATTTCTACAAAGAGGAGCAAGCAATCCATGTATAAAGGCCAAACAACAGAAGTTCCAATTAAGAAGCTCCCCATGGACAATAAACCACTGAAGAAACATTGGAATCTTCCAAAAAAGCAGCAAGAACTAAGGCGAATCGAAACACCAACAGGAGACAAAAGCCCAAATGTAATCTCTGAAAATATTATGGAGTGTTTATCAAGTATCCTCTTGAGAATGAGTACTGCCAAGTGCCAATGA 813 0.4244 MNTSVRTRNQPRKPPMTHEKVEMRASLREGTRNIAAKGGRTSSKDRKIALQQDVERLKKKLRDEENIHRALERAFNRPLGSLPRLPPYLPPHTLGLVAEVAVLEEEIVRLEEQVLQFKQNLYHEPVYISASKMKLQHSASAKIANSKDSPKLSKLKSISQILGGAATSTTRPSRSTTLPEAKEQKENQPYTISTKRSKQSMYKGQTTEVPIKKLPMDNKPLKKHWNLPKKQQELRRIETPTGDKSPNVISENIMECLSSILLRMSTAKCQ* 271
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g4182 270 MobiDBLite consensus disorder prediction 12 27 - -
Lja1g4182 270 PANTHER TRANSCRIPTION FACTOR 1 268 - -
Lja1g4182 270 MobiDBLite consensus disorder prediction 1 46 - -
Lja1g4182 270 MobiDBLite consensus disorder prediction 162 205 - -
Lja1g4182 270 Pfam Leucine-zipper of ternary complex factor MIP1 43 124 IPR025757 -
Lja1g4182 270 Coils Coil 93 120 - -
Lja1g4182 270 Coils Coil 40 74 - -
Lja1g4182 270 PANTHER EXPRESSED PROTEIN 1 268 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g4182 Lja-Chr1 53266978 53270369 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g4182 - - gmx:100807554 303.523
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja1g4182 1 53266978 53270369 Lja1g4182 1 53266978 53270369 ECH