Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g4181 ATGGCACAGTCTTCTTCTATCTCTTCGCTTTATCACGCACCTTCTTCGTGTCTTCATCAACACCGCCGAATCTTTCTCGCTTCTCAACGCACCGGAACCGATTCCACCGCCACCGATTCCACCGCCACTCTCACGTTTGCCTCCACTTCGAACTCCGCTCCCAAAGTCGTCGTCACCAGAGAACGCGGCAAGAACGCCAAGCTCATCGCTGCTCTGGCCAAACATGAAATCAATTGTTTGGAGCTTCCGCTCATTGAGCACACCCGGGGACCTGATTTAGACAGGCTTCCTTGTGCTTTAAGTGATAATACATTTGATTGGATTGTCATAACTTCCCCTGAGGCGGGCTCAGTCTTTCTAGAGGCATGGAGAGCTGCTGGGATGCCACATGTCCGAATAGGTGTTGTTGGGTCTGGAACTGCAAGCATTTTCAAGGAAATTTTGCAGTCTTCAAACCAATCACTTGATATTGCCTTTGCACCATCGAAAGCAACCGGAAAGGTTTTGGCCACAGAGCTTCCTAAGATTGGAAATAAATCCACTGTTCTATATCCTGCTTCTGCGAAGGCTAGCAATGAGATTGAGGACGGGCTTTCAAACCGTGGATTTGAAGTTACACGGATGAATACATATTCGACGGTGCCAGTTCAACATGTTGACCTTATGGTTCTAAAGGAAGCTCTTTCTGCCCCTGTTGTTACAGTAGCTTCGCCATCTGCAATTCGAGCCTGGAAGAATCTTATTTCAGATTCAGAGTGGAGCAATTATGTTGCATGCATTGGTGAGACTACTGCTGCAAAAGCAAGAGGATTAGGATTTAGAAATGTTTACTACCCTACACAACCAGGCCTTGAAGGCTGGGTTGAAAGCGTTCTTGAAGCATTAGGATCGTATGATGAATTATTGAGGTAG 912 0.4682 MAQSSSISSLYHAPSSCLHQHRRIFLASQRTGTDSTATDSTATLTFASTSNSAPKVVVTRERGKNAKLIAALAKHEINCLELPLIEHTRGPDLDRLPCALSDNTFDWIVITSPEAGSVFLEAWRAAGMPHVRIGVVGSGTASIFKEILQSSNQSLDIAFAPSKATGKVLATELPKIGNKSTVLYPASAKASNEIEDGLSNRGFEVTRMNTYSTVPVQHVDLMVLKEALSAPVVTVASPSAIRAWKNLISDSEWSNYVACIGETTAAKARGLGFRNVYYPTQPGLEGWVESVLEALGSYDELLR* 304
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g4181 303 Gene3D - 206 295 IPR036108 GO:0004852|GO:0033014
Lja1g4181 303 Gene3D - 98 205 IPR036108 GO:0004852|GO:0033014
Lja1g4181 303 CDD HemD 56 291 IPR003754 GO:0004852|GO:0033014
Lja1g4181 303 Pfam Uroporphyrinogen-III synthase HemD 68 289 IPR003754 GO:0004852|GO:0033014
Lja1g4181 303 PANTHER UROPORPHYRINOGEN-III SYNTHASE, CHLOROPLASTIC 12 298 IPR039793 GO:0004852|GO:0006780
Lja1g4181 303 SUPERFAMILY HemD-like 55 296 IPR036108 GO:0004852|GO:0033014
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g4181 K01719 - gmx:100808086 459.529
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja1g4181 1 53254744 53260679 Lja1g4181 1 53254744 53260679 ECH