Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g4177 ATGTTATGTGCTCCAAATGATAAAAATCGTCCACTTTTTGCAGCCAAGGATGTCAAACCCTTCTACTTGGAACACAGCCCCAAGATTTTCCCACAAAACAAGGGCCTATTGGCATCTATAGGAAATTTGTTTGGAACATTAAGAGGACCAAAATATGATGGGAAGTACCTTCATAAGGTAGTGAAGGAGAAGCTTGGAGAAATTCGTTTGCGCGAGACACTCACCAATGTTGTGATTCCAACCTTTGACATCAAAACAATGCAACCAACTGTGTTCTCTTCTTATCAAATCAAGAGGTCCCCTTGCTTGGATGCTCAACTCTCTGACATATGCATCAGTACCTCTGCTGCACCTACTTATCTTCCTGCCTACTCCTTCAACAATCAAGACTCACAAGGGAATGTACAAGAATTCAACCTCATTGATGGTGGTGTTTGTGCAAATAATCCGACTCTATTAGCTGTGAATGAAGTAACAAGGCAGAGCATTAATCAAAATCCTGACTTCTTTTCCATCAAGCCCATGGAATATGGTCGCTTCCTCATTATCTCACTGGGAACAGGGACAGCTAAGAATGAAAAAAAGTTCAATGCAAAAATGGCAGCTAAATGGGGTTTGTTGGATTGGTTAACAAACAGTGGTTCAACTCCCTTAATTGACATGTTTACTCAATCATCTGGGGATAGGATATGGTTGATTTTCATCTTGCTACCGTCACTGAAGCCCTTCATTCACAAGATCATTACCTTCGGATACAGGATGATACATTGA 771 0.4086 MLCAPNDKNRPLFAAKDVKPFYLEHSPKIFPQNKGLLASIGNLFGTLRGPKYDGKYLHKVVKEKLGEIRLRETLTNVVIPTFDIKTMQPTVFSSYQIKRSPCLDAQLSDICISTSAAPTYLPAYSFNNQDSQGNVQEFNLIDGGVCANNPTLLAVNEVTRQSINQNPDFFSIKPMEYGRFLIISLGTGTAKNEKKFNAKMAAKWGLLDWLTNSGSTPLIDMFTQSSGDRIWLIFILLPSLKPFIHKIITFGYRMIH* 257
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g4177 256 Pfam Patatin-like phospholipase 48 154 IPR002641 GO:0006629
Lja1g4177 256 Gene3D Cytosolic phospholipase A2 catalytic domain 1 234 - -
Lja1g4177 256 ProSiteProfiles Patatin-like phospholipase (PNPLA) domain profile. 1 155 IPR002641 GO:0006629
Lja1g4177 256 SUPERFAMILY FabD/lysophospholipase-like 1 225 IPR016035 -
Lja1g4177 256 PANTHER PATATIN 1 230 - -
Lja1g4177 256 PANTHER XYLOSE ISOMERASE 1 230 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g4177 Lja-Chr1 53190946 53193409 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja1g4177 1 230 Miscellaneous Gene Families AT2G26560 60.000 5.38e-100 296
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g4177 - - lja:Lj1g3v1648860.1 523.472
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja1g4177 1 53190946 53193409 Lja1g4177 1 53190946 53193409 ECH