Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g4173 ATGTGGGGGTTTGGTGGAAGATATTATTGGGGAAGAAAGGTTGAGAAACCGGAGGGGATAGTTGTGGTGTTTGCATGGATGTCAAGCGAGGAGAAGCACTTGATGAGATACGTGGAGCTCTACTCTTCTCTTGGATGGGATTCACTCATCTGCCACTCTCAATTTCTCAATATGTTCTTCCCTGAGAAAGCCACAGTACTTGCTGTTGATATTCTTAATGAACTTCTTGAGGTGCTGAAAAATAGGCCATGTCCCATTGTCTTTGCATCATTTTCAGGGGGTGCACAATCTTGTATGTTAAATATTCTTCAGGTTATTAGTGGGAAGTGTGAAACACACAATATGGATGATTACCGTCTTGTTAGAGACTGTATTTCTGGCTATATTTATGATTCAAGTCCAGTGGATTTTAGCAGTGATATGGGTGTTCGATTTTTTCTACACCCAAATGTTTTAAAAGTGCCTCATCCACCAAGATTTGCTTCATGGATTGCTAATGGCATAGCATCTGGTCTTGATTCCCTCTTCCTCAGCAGATTTGAATCACAGCGTGCAGAGTTTTGGCGAACACTATACTCTACCACTAGTATGCAGGTCCCATATCTCATTCTTTGTTCAGAAAATGATGATCTTGCTACTTTTGAAGTTATTTCGAATTTTTTCAATCGACTAAAATACCTTGGCGGGGATGTCAAACTGATAAAATGGAGTTCCTCTCCTCATGTAGGTCATTTTCGGCATCATCCAGATGAATACAAGACTGCTATCACTGAGATCCTTGGCAAGGCAGTTGCAATTTATCGTCACAAAAATCCACAAATTCGAGATGAGAAACTGGGCATAGAGGGAACAGAAGATGAGATCACTGATCCTTTCTCCGAAATGAGGAAAGCAGCAATGACCTCAACCAGTTTCCAGGGTTTTGCTCTTGCTCCTAGTGAGCATTTGTCTCATAATTCAATGGAGTATTACGATGGAAAAGATGTTAGCTCCGTAGCAGATGACCGCAAAGGAAGTTTTATTCATCTGCCAAGCCGTCCCAGCATCAATGCAAACGGGGTTCTTGGCCAAGTATTATTTGATGTCTGTGTTCCAAAGAACGTTGAAGATTGGGATGTCAGATCCAATCCAGGATTATTAGCTGCTACAAGGAGGCATGTTCCATTTAATCCTATAAAATGCATTCGGCGCTCAAGGTTGTAA 1203 0.4148 MWGFGGRYYWGRKVEKPEGIVVVFAWMSSEEKHLMRYVELYSSLGWDSLICHSQFLNMFFPEKATVLAVDILNELLEVLKNRPCPIVFASFSGGAQSCMLNILQVISGKCETHNMDDYRLVRDCISGYIYDSSPVDFSSDMGVRFFLHPNVLKVPHPPRFASWIANGIASGLDSLFLSRFESQRAEFWRTLYSTTSMQVPYLILCSENDDLATFEVISNFFNRLKYLGGDVKLIKWSSSPHVGHFRHHPDEYKTAITEILGKAVAIYRHKNPQIRDEKLGIEGTEDEITDPFSEMRKAAMTSTSFQGFALAPSEHLSHNSMEYYDGKDVSSVADDRKGSFIHLPSRPSINANGVLGQVLFDVCVPKNVEDWDVRSNPGLLAATRRHVPFNPIKCIRRSRL* 401
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g4173 400 PANTHER UNCHARACTERIZED 1 320 IPR008547 -
Lja1g4173 400 SUPERFAMILY alpha/beta-Hydrolases 64 262 IPR029058 -
Lja1g4173 400 PANTHER DUF829 DOMAIN PROTEIN 1 320 - -
Lja1g4173 400 Pfam Eukaryotic protein of unknown function (DUF829) 125 371 IPR008547 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g4173 Lja-Chr1 53116460 53127722 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g4173 - - gmx:100810227 685.641
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja1g4173 1 53116460 53127722 Lja1g4173 1 53116460 53127722 ECH