Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g4166 ATGCAAGCGGTGGGGAGGTTAGGCAGTTACATTAGCCAAGGCGTGTACACTGTATCAGCGCCCTTTCATCCATTCGGTGGTGCCGTTGATATCGTCGTCGTGGAGCAGCAAGATGGGAGTTTCAAGTCTTCACCATGGTACGTTCGATTTGGGAAGTTTCAAGGGGTTTTGAAGGCCAAGGAGAAGGTTGTTCAGATATGTGTTAATGGGGTTGAGGCTGATTTCAAAATGTATCTTGGACATAATGGGGAGGCTTTCTTTCTCAGGGAATTGGATGTGGAACCTGATTTGATGTGTCCACCATCTTCTGATGATGAGGTTGATGTGGATGATGATCAGTCTATGAAACTCAGGTCTAAGACTTGTGATGAGTTTGATTCTGAGAATGGTGGTACTAAGGTGGTTGTGGGTAGGACTGGTTCTCGCCGCTCCCGGATACTTGGCCTTATGTTTGGGCAAAGGTCTTTGAAGGAGGTGGAGGTTGAAATGGGCCAAATGGTTGGTGGGAATAGGGCGAATTCGATGGACCGTGCTGAGATTGCAGCTAATCTTTTGGAGCTGAACTGGTCTACAAATCTCCCCAGTCCAAAATTTGAGGATAGCTCCTCAAGGGATCATGACATGCTCATGGATGATGGTGAATGTGACCCTATTGGGAAAGTGCGTTCCTTTTCTGACTCTGACCTACAAGTTGCTTATGTGGAGCTTGAAGCAAGCATGGATAAGCAATTGAGTGGAGAAGGGGTTTCAGGTGCGAGCTCTTTTATTGATGCACAGGGTGGTGATATTTCTGAGGAGGAGGACATTGCAGAGAGTTCCAAAGTGGGTGAGGATAGTTCAAGTGAACGGGTTCGTGAGGTGCTGTACCTTGCTGATGAAGGAAGTGGACAACTCCATGTCGGTGACGAAGTCCTGCTTGCTGCAACTGTTTTGCTATCTGAGGGTACAGAAACTGAGGATGTCATGAAGAATGATCTTGGAATGCCAGTGATGGAGGTCTCTGAGTTTCATCATCAAGTTCAGCTGACAGCTTGTTCTGGTCCTGATGTTGAAGACCCAACAACAACTCCAAAATCTCAAATTGTCAATATAGATCAAGGACATTGTTCAATTGAGAACATTGAGTCAAACGGTGTCACCAAACCTCACAATTGCAGCAGCCAGGATGACCAAACCCTAGATGAGAATAATAGGAAGGAGAAAGATTTCTTCAGCGTGTTATCTTCTCCTCAGGACTCTATTGGTGATAGTTTATCTAGAAAAGCATCAACGAGCTTACTACCACCTAGTTCAGCAGAAGAAAATTTCCTTTTTGGCGACCTTGATGAAGGTATAATCAATGATCAATTTGAGGAATCACTCTCCCCTAAATATGTAGATAAAGAAGATCATCTTTCTTGTGAGAACGACGCGGAAAAGTTAAGAGTAACATCCAGTCCCATAGTTATCCCGAGAAATGAGGATGCTGGGGAAGAAGTTGTGAAGCGCACAGAATCCTTGCCAAATATTTATTCTGGTAGTAACAGTCTGGGCCAACATGTTCGCCTTCGTTTAAGTCTATCACTTGACTCCAAGCTTCCTTGCAAAGATGACTTGAAATGTCTAAAATCAGATAAAGACAAAGAAAACCAGTTATCACTTGAGGCCGCAGATGGCAAGGATTACCATAATTCCGGGGAATTTAAAAGTACTCTTCCCCTTGGAGAAACATCAACAGACAACCCTCCCCCTGGTGGAAATTGGAGAATTTGGCCTTTCTCCTTGAGGAGATCAGGATCAAGAAATTCTTTGCCGCCTATTCCAAGTGATGCAAAAAATAATACTCTTGGAGATTCCTCAAAGAATACATTTAGCCCAGACATGAACAAAAATGAGCTAAAATCCAATCTAAAGAGAAGGAGAGTTAGGGAAACAACTCCAACTTCTGAACAGGTAGCATCGTTGAATCTGAAGGAAGGGAGGAACACTGTAACCTTCACTTTCTCTACAGCTATGCTGGGGAAGCAGCAGGTTGATGCTCAAATATTCTTGTGGAAATGGAACGCTCGTATAGTGATCTCAGATGTGGATGGGACAATTACAAGGTCAGATGTTCTTGGTCAATTCATGCCTTTGGTTGGCGTTGACTGGTCACAGACAGGTGTTGCACATTTATTCTCTGCTATCAAGGAGAATGGTTACGAACTACTTTTTCTCAGTGCTCGGTCAATTTCTCAGGCCTATCTTACACGACAATTCCTACTCAACCTTAAACAGGATGGTAAAGTTCTACCAGATGGTCCTGTTGTTATTTCCCCTGATGGACTTTTTCCCTCTCTATATCGTGAAGTTATTAGGAGGGTTCCTCATGAATTCAAAATCGCATGCTTAGAGGGCATCAAGGCACTTTTTCCTTCTGATTGCAATCCGTTCTATGCTGGTTTTGGAAATAGGGACACTGATGAAATCAGCTACCTTAAGGTTGGAATCCCTATAGGAAAAATCTTCATTATTAATCCCAAGGGAGAGATAGTGGTAAACCGAAGTCTTGACACAAAATCATACACTTCTCTGCATGCTCTCGTGAATGGAATGTTCCCTCCTACGAACTCAACAAACTCTTCTGAGCAGGAGGATTTTAATACATGGAATTACTGGAAGCTATCCCTTCCTGCTATAGATATTTGA 2667 0.4346 MQAVGRLGSYISQGVYTVSAPFHPFGGAVDIVVVEQQDGSFKSSPWYVRFGKFQGVLKAKEKVVQICVNGVEADFKMYLGHNGEAFFLRELDVEPDLMCPPSSDDEVDVDDDQSMKLRSKTCDEFDSENGGTKVVVGRTGSRRSRILGLMFGQRSLKEVEVEMGQMVGGNRANSMDRAEIAANLLELNWSTNLPSPKFEDSSSRDHDMLMDDGECDPIGKVRSFSDSDLQVAYVELEASMDKQLSGEGVSGASSFIDAQGGDISEEEDIAESSKVGEDSSSERVREVLYLADEGSGQLHVGDEVLLAATVLLSEGTETEDVMKNDLGMPVMEVSEFHHQVQLTACSGPDVEDPTTTPKSQIVNIDQGHCSIENIESNGVTKPHNCSSQDDQTLDENNRKEKDFFSVLSSPQDSIGDSLSRKASTSLLPPSSAEENFLFGDLDEGIINDQFEESLSPKYVDKEDHLSCENDAEKLRVTSSPIVIPRNEDAGEEVVKRTESLPNIYSGSNSLGQHVRLRLSLSLDSKLPCKDDLKCLKSDKDKENQLSLEAADGKDYHNSGEFKSTLPLGETSTDNPPPGGNWRIWPFSLRRSGSRNSLPPIPSDAKNNTLGDSSKNTFSPDMNKNELKSNLKRRRVRETTPTSEQVASLNLKEGRNTVTFTFSTAMLGKQQVDAQIFLWKWNARIVISDVDGTITRSDVLGQFMPLVGVDWSQTGVAHLFSAIKENGYELLFLSARSISQAYLTRQFLLNLKQDGKVLPDGPVVISPDGLFPSLYREVIRRVPHEFKIACLEGIKALFPSDCNPFYAGFGNRDTDEISYLKVGIPIGKIFIINPKGEIVVNRSLDTKSYTSLHALVNGMFPPTNSTNSSEQEDFNTWNYWKLSLPAIDI* 889
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g4166 888 PANTHER LIPIN 1 888 IPR026058 -
Lja1g4166 888 MobiDBLite consensus disorder prediction 245 278 - -
Lja1g4166 888 PANTHER GH19076P 1 888 - -
Lja1g4166 888 SUPERFAMILY HAD-like 677 828 IPR036412 -
Lja1g4166 888 MobiDBLite consensus disorder prediction 589 623 - -
Lja1g4166 888 Pfam lipin, N-terminal conserved region 1 94 IPR007651 -
Lja1g4166 888 MobiDBLite consensus disorder prediction 374 393 - -
Lja1g4166 888 Pfam LNS2 (Lipin/Ned1/Smp2) 638 860 IPR013209 -
Lja1g4166 888 MobiDBLite consensus disorder prediction 374 391 - -
Lja1g4166 888 MobiDBLite consensus disorder prediction 547 623 - -
Lja1g4166 888 MobiDBLite consensus disorder prediction 406 429 - -
Lja1g4166 888 MobiDBLite consensus disorder prediction 563 577 - -
Lja1g4166 888 SMART lns2 684 840 IPR031315 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g4166 Lja-Chr1 53065400 53073335 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g4166 K15728 - gmx:100811824 1006.51
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja1g4166 1 53065400 53073335 Lja1g4166 1 53065400 53073335 ECH