Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g4165 ATGGAGTCACGAGCTCAATGGAACCCGCTTCTATCATTTTCTACCTTCATCCACCAACACTGCCTCCACCTCGCAACTCGTTTCGACGAAACCAAGCGACTCGCCGGAACCCTAGTTCAATCTCACGTCAACCCCTTCTTCCGCGCCAAACACGCCCTTGCCGCCACATTAACCTCCCACCACGTCGCCAAGTCCCTCGCCGGCACCGCCGTCTACACCGTCAGCAACTCCAACAACGAGTTCGTTCTTATCTCTGATGCCGACGCTGCTAAGTCCATTGGATTGCTTTGCTTTCGCCAGGAAGACGCTGAAGCCTTCCTTGCTCAAGTTCGATCGCGGAAACGAGAACTTCGAGGCAATGCTAGGGTTGTCCCCATCACTCTTGACCAGGTGTACATGTTGAAGGTTGAAGGTATTGCATTTCGATTTTTACCTGATCCTATACAAATAAAGAATGCTATGGAGCTCAGACCAGCCAATAAGGAAGGTTTTGATGGGGTTCCTGTTTTTCAGTCAGACCTTTTGGTTGTGAAGAGGAAGAATAAGCGTTATTGCCCTGTATATTTCTCTAAGGAAGATATTGAGCAGGAACTGTCCAAGGTTTCTAGAGCATCTAAAGGAGCTGGACTTTCTCAGCATATAATGGTTGGCAGCTTTGAAGATGTACTGAGAAAAATGGAGATGAGTGAAGGGAATTCAGGGTGGGAGGATTTGATTTTTATTCCACCAGGAAAAAGTCATTCTCAACACATACAAGAGATTAATGCTTGA 771 0.4721 MESRAQWNPLLSFSTFIHQHCLHLATRFDETKRLAGTLVQSHVNPFFRAKHALAATLTSHHVAKSLAGTAVYTVSNSNNEFVLISDADAAKSIGLLCFRQEDAEAFLAQVRSRKRELRGNARVVPITLDQVYMLKVEGIAFRFLPDPIQIKNAMELRPANKEGFDGVPVFQSDLLVVKRKNKRYCPVYFSKEDIEQELSKVSRASKGAGLSQHIMVGSFEDVLRKMEMSEGNSGWEDLIFIPPGKSHSQHIQEINA* 257
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g4165 256 Gene3D - 145 226 - -
Lja1g4165 256 Gene3D - 67 144 - -
Lja1g4165 256 Pfam Tic22-like family 10 253 IPR007378 GO:0015031
Lja1g4165 256 PANTHER PROTEIN TIC 22, CHLOROPLASTIC 6 254 - -
Lja1g4165 256 PANTHER PROTEIN TIC 22, CHLOROPLASTIC 6 254 IPR007378 GO:0015031
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g4165 Lja-Chr1 53060228 53063843 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g4165 - - gmx:100802935 401.749
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja1g4165 1 53060228 53063843 Lja1g4165 1 53060228 53063843 ECH