Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g4158 ATGCCGCCATTTTCTTCCACCTCGAAGGCACTTCGCTCCTTAGCATCACGCAGAAATGGATTCACTCAATTGATTAGGTCTAGCAACAGCGCTGAGAAAAAACTCGATGGTTGCCGATGCTTTACTTCCATTGCCGACAGAGCCACCCATCCGATTCAACCCTTTGGCTCTCGCACCGGTTTTGCCCCCATAACCGGAGTTTTCAAGAGTATCAATAATAATTCTGTGCAATCAAGGCACTTTCTTGGATGTGGTGATGGTGAAGAAGGTGTTCTATCTAAAACCTATGAGGAGAAGCGCGTTTTAGGGTACTCGCCGGAGCAATTGTTTGAGGTTGTTGCAGCTGTTGATTTCTATCACGGTTTTGTGCCGTGGTGTCAGAAGTCCAATATACTTAAACATTTTCCTGATGGGTCATTTGATGCTGAGTTGGAGATTGGGTTTAAATTTCTTGTTGAGAGTTATGTTTCTCATGTTGAATTGGAAAGACCGAAGCGTATCAAGACAACTGTGTCACAGAGTACCCTATTTGACCATTTAATAAACGTATGGGAATTTAATCCTGGCCCGGTTCCAGGAACTTGCAGTCTTTATTTCTTGGTCGATTTTAAGTTTCAGTCTCCGCTTTACAGCCAGATTGCATCAATGTTTTTCAAGGAGGTAGCCTCTAGGATGGTAGGTTCATTTACTGAGCGTTGCCGTGTGATATATGGACCGGAAGTGCGGGTCCTGGAAAAATCCTATGGAGAAAATGCATGA 759 0.4401 MPPFSSTSKALRSLASRRNGFTQLIRSSNSAEKKLDGCRCFTSIADRATHPIQPFGSRTGFAPITGVFKSINNNSVQSRHFLGCGDGEEGVLSKTYEEKRVLGYSPEQLFEVVAAVDFYHGFVPWCQKSNILKHFPDGSFDAELEIGFKFLVESYVSHVELERPKRIKTTVSQSTLFDHLINVWEFNPGPVPGTCSLYFLVDFKFQSPLYSQIASMFFKEVASRMVGSFTERCRVIYGPEVRVLEKSYGENA* 253
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g4158 252 CDD COQ10p_like 96 236 IPR044996 GO:0006744|GO:0045333|GO:0048039
Lja1g4158 252 SUPERFAMILY Bet v1-like 95 238 - -
Lja1g4158 252 Gene3D - 93 238 IPR023393 -
Lja1g4158 252 PANTHER POLYKETIDE CYCLASE / DEHYDRASE AND LIPID TRANSPORT PROTEIN-RELATED 1 246 - -
Lja1g4158 252 PANTHER SPERM PROTEIN HOMOLOG 1 246 IPR044996 GO:0006744|GO:0045333|GO:0048039
Lja1g4158 252 Pfam Polyketide cyclase / dehydrase and lipid transport 103 229 IPR005031 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g4158 Lja-Chr1 53018536 53022878 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g4158 K18588 - gmx:100778674 401.749
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja1g4158 1 53018536 53022878 Lja1g4158 1 53018536 53022878 ECH