Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g4154 ATGGCGGAGTTAGGGTTTCAGGAGCGAAGCTCGTGGAGGAGGCTTGGTCTAATTCCTCGTGACACCAGCCCCGACTCCGCCGTCTTCACTCTCGAATCCAACCTCAGCCTCTTCTCCTCTGCTTCCGCCTCCGTTGATCGATGCTCATTCGCCTCTGACTCTCACGACCACCACTCTTTCGCCTCTCAACTCTCCCTGCATTTGGCAGGGTATGAGGGTGATTTTGCTCACTGCAGTGGTCCAGATCCAAATCCATACAAATCTGCACTGCGCGACAACCACAAGCACCGTCGTTTTGCCAGGAACAGCGAAAACGCCAAAGTTCAAAACGAAGATAGTGATTTTGACATTGAAGATGAAAGCCAGCAAGTGGAACTGGATTCAGCAAGAAACTCTTTCTCTTTAGCTCTCAAAGAATGCCAAGATAGGAGATCGAGATCTGAAGCCTTGTTAGAGAAGGCTTATGCATTAGATCTGAGCAATACAGCTGCATCTTCTCCGCGCCTCGGAACGGTGAGGAAGAACACACTTTCTTCTCGAAGGTCTGGTACTGCCACTGCCACTTTCGCCAGTCCCGGAACACCGAATTATCGTGGTGCAATGCAAAAGGGGTGGAGCTCTGAGCGAGTCCCCTTGCATGGAAGTGCTGCCAGGAATCAGGTGGTGTTGCCATTCAGCAATGGAAGAGCATTGCCATCAAAATGGGAAGATGCAGAGAGGTGGATTCTCAGTCCTGTTACCAGAGATGGCATGGGCAGGGCTTCGGTTCAGCAGCCCAACAAGAGGCCGAAGTCCAAGAGCGGGCCGCTCGGTCCCCCTGGTATCGCGTATTATTCAATGTTTTCTCCGGCTGCGCCAATGTGTGAGAGGCGTAACACGGGGAATTTTATGGCAGCTTCTCCATTTTCAGCTGGGGTTCTCTCAGCTGAGGGACTAACAATCCGTTCCGGTGGCCATGGGGGAGCGGTTGCCACGACTACTGAACCTTGTATGGCTCGATCATCTAGTGTCCATGGATGTTCCGAGATGCTGAATCAGCCATCAGTGCCTGGCCAAGAAGATAGGTTTGATTGCTTCAAAGGGGTGGGAACTGATGTATCTCATGCTGTTTCAAGAAGGGACATGGCAACCCAGATGAGTCCACAGGGTAGCTCAGGCTCCTCTTCTAATTTGAGGCTTTCTTTCTCTGCCTCCACTCCATCTGCCTTGCCTATCACTGAATTGCAGGGTGGTTCTTCTGCTAAAGTGAATATCAGGGATGTGCAGATAGACGAACATGTAACTTTGACAAGGTGGTCCAAGAAAAACAGGGCCATGTTCTCCGGCAGAGCCTCAGAAAATGTTGAAAGTAGGAAAATAAGCGCTCAATCTTCAGCTTGGGACATATCTGAAACATCAAAAACAGACTCAAAGGCAAAAAGTGAGGAAGCCAAAATCACAGCATGGGAGAACTTGCAGAAGGCAAAAGCTGTGGCAGCAGTTCGGAAACTAGAGATGAAGTTGGAAAAGAGGCGAGCGTCCTCTATGGATAAGATTATGAACAAGCTTAGATTGGCCAAAACAAAAGCCCAAGAAATGAGAAGTTCTGTTTCACCCAACCAAACTGATCAAGTTGTAAGAACTTCTCACAAGGCTTCATCATTTCTTAGAACCAGCCAGATGCGTTCCTTAAGTGGTTGTTTCACTTGCCATGCCTTTTAA 1701 0.4921 MAELGFQERSSWRRLGLIPRDTSPDSAVFTLESNLSLFSSASASVDRCSFASDSHDHHSFASQLSLHLAGYEGDFAHCSGPDPNPYKSALRDNHKHRRFARNSENAKVQNEDSDFDIEDESQQVELDSARNSFSLALKECQDRRSRSEALLEKAYALDLSNTAASSPRLGTVRKNTLSSRRSGTATATFASPGTPNYRGAMQKGWSSERVPLHGSAARNQVVLPFSNGRALPSKWEDAERWILSPVTRDGMGRASVQQPNKRPKSKSGPLGPPGIAYYSMFSPAAPMCERRNTGNFMAASPFSAGVLSAEGLTIRSGGHGGAVATTTEPCMARSSSVHGCSEMLNQPSVPGQEDRFDCFKGVGTDVSHAVSRRDMATQMSPQGSSGSSSNLRLSFSASTPSALPITELQGGSSAKVNIRDVQIDEHVTLTRWSKKNRAMFSGRASENVESRKISAQSSAWDISETSKTDSKAKSEEAKITAWENLQKAKAVAAVRKLEMKLEKRRASSMDKIMNKLRLAKTKAQEMRSSVSPNQTDQVVRTSHKASSFLRTSQMRSLSGCFTCHAF* 567
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g4154 566 MobiDBLite consensus disorder prediction 372 393 - -
Lja1g4154 566 MobiDBLite consensus disorder prediction 100 121 - -
Lja1g4154 566 MobiDBLite consensus disorder prediction 249 272 - -
Lja1g4154 566 PANTHER OS02G0116800 PROTEIN 85 564 - -
Lja1g4154 566 MobiDBLite consensus disorder prediction 172 201 - -
Lja1g4154 566 Pfam Remorin, C-terminal region 452 556 IPR005516 -
Lja1g4154 566 PANTHER REMORIN FAMILY PROTEIN 85 564 - -
Lja1g4154 566 MobiDBLite consensus disorder prediction 172 195 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g4154 Lja-Chr1 52963525 52967619 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g4154 - - adu:107495808 662.144
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja1g4154 1 52963525 52967619 Lja1g4154 1 52963525 52967619 ECH