Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g4135 ATGCTCAGACAGATTCTTCTGCTTCGCGCTCGCCTCCATAGCCCCACCGCCAGAGCCGTTGTGGCGCGTCACCGGCCGTGGTGCAGCGCCACCACGGACTCGCCGTCGAAAGTAATCCCCAGCACCACCTTCAATCTGCGGGATCAGAAATGGAGGGATAATGAAGAGGAGATTCTCAGGGACATTGAACCCATCGTTTTGCTTGCCAAGGACATTCTTTTCTCGCCAAGGTACATGGATGGACAGGTACTGAATGTGGAGGAGGAGAAAGCTATAGTAGACAAGCTCCTTGCTTACCATCCAGATTCTGAAGATAAGATTGGATGTGGTCTTGAATCCATTATGGTTGACCGTCACCCCGAATTTGGGTACTCAAGGTGTCTTTTTGTTGTAAGAACTGATGGTGTTTGGATCGACTTCTCCTATAAGTGGTGCCTTCAGAATTACATCAGAGATAAGTACCCTATCCACGCAGAAAGGTTTATTCAAAAACATTTTAAGGATAACAAGTGTCTTTCGAAATACATCAAAGATAAGTACCCGGCCCTCAAAGAAAGGTTTATTCGATAA 570 0.4684 MLRQILLLRARLHSPTARAVVARHRPWCSATTDSPSKVIPSTTFNLRDQKWRDNEEEILRDIEPIVLLAKDILFSPRYMDGQVLNVEEEKAIVDKLLAYHPDSEDKIGCGLESIMVDRHPEFGYSRCLFVVRTDGVWIDFSYKWCLQNYIRDKYPIHAERFIQKHFKDNKCLSKYIKDKYPALKERFIR* 190
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g4135 189 Pfam Protein of unknown function (DUF3223) 73 146 - -
Lja1g4135 189 Gene3D - 59 153 - -
Lja1g4135 189 PANTHER DCL PROTEIN (DUF3223) 21 169 - -
Lja1g4135 189 PANTHER - 21 169 IPR044673 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g4135 Lja-Chr1 52552840 52555346 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g4135 - - gmx:100818770 216.853
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja1g4135 1 52552840 52555346 Lja1g4135 1 52552840 52555346 ECH