Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g4127 ATGAAGCGTTCACTTCCCTCCGGCGAGGATAGGAAGATGAAGAAGGTGAAACTGGCAGAAACCGATGATGATGGTGAAGGAGAAGATGATGTTTGTGGGAAGATTCATGGCCCTGGCCTTGGTTGTTTCGATGACAATCTTCTGTTCGAGGTGTTGAAGCACGTGGATGCAAAGTCGCTGGCTATGGCGGGTTGTGTCAACAAGCAGTGGCACAAGACGGCGCAGGATGAGAGGCTCTGGGAGCTGATCTGCACCAAGCAGTGGGCCAACACCGGCTGCGGCGAGAAACAGCTGCGATCCGTGGTTCTCGCGCTCGGTGGCTTCCGCAACCTCCACTCTCTTTGTCTCTTACCACTTTCCAAATCTCAAACCTCTGCTTCCTCTGTTTCCTCTGCTTCATCTTCGTCTTCATCCTCGCCGTGGGGTCCAATCCCGCCGCCAGTGATCAGGTCAAAGCCGCTACCTCGTTTGGGGAAAGACGAGGTTCATCTCTCCCTCTCGCTTCTCTCTATTCGGTACTACGAGAAGATGAATTTCAACAACAGACCCAGATGA 555 0.5315 MKRSLPSGEDRKMKKVKLAETDDDGEGEDDVCGKIHGPGLGCFDDNLLFEVLKHVDAKSLAMAGCVNKQWHKTAQDERLWELICTKQWANTGCGEKQLRSVVLALGGFRNLHSLCLLPLSKSQTSASSVSSASSSSSSSPWGPIPPPVIRSKPLPRLGKDEVHLSLSLLSIRYYEKMNFNNRPR* 185
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g4127 184 Gene3D - 39 138 - -
Lja1g4127 184 MobiDBLite consensus disorder prediction 128 155 - -
Lja1g4127 184 PANTHER F-BOX PROTEIN GID2-LIKE 5 178 - -
Lja1g4127 184 PANTHER F-BOX ONLY PROTEIN 48-RELATED 5 178 IPR045118 GO:0019005|GO:0031146
Lja1g4127 184 MobiDBLite consensus disorder prediction 1 22 - -
Lja1g4127 184 Pfam F-box domain 45 81 IPR001810 GO:0005515
Lja1g4127 184 SUPERFAMILY F-box domain 40 89 IPR036047 GO:0005515
Lja1g4127 184 MobiDBLite consensus disorder prediction 1 29 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g4127 Lja-Chr1 52343479 52344683 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g4127 K14495 - gmx:100527591 231.491
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja1g4127 1 52343479 52344683 Lja1g4127 1 52343479 52344683 ECH