Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g4125 ATGTCCGACTCGGAAATCACCTCCGCTGCCGCACCGGAGCAAGAAACCACCGTCCAACCACCGCAGCCCAACCCTGAGAAACCCTCCGCCACCAACCTCAGCGGCATCTCCTTCAGCATTTGGCCTCCCACCCAGCGCACCCGCGACGCCGTCATCAACCGCCTGATCGAAACCCTATCCACCCCCTCTGTCCTCTCCAAGCGCTACGGAACAATGCCTGCCGATGAGGCCTCCGCCGCTGCTCGCCAGATCGAGGATGAGGCCTTTGCTGCCGCCGGTGGCTCCGCCGCTGCTGATACCGACGGCATCGAGATCCTCCAGGTGTACTCCAAGGAGATCAGCAAGCGGATGCTCGATAGTGTCAAGTCCAGAGCCACCACAGGTTCCGCCGCCGCTGATAACGGTGCTTCTGATGTTCCTCCTTCCCCTTCCCCTGCCGAAGAGGATGCTCCTCCCGCAGCTGATTCTGAAACCTGA 477 0.6184 MSDSEITSAAAPEQETTVQPPQPNPEKPSATNLSGISFSIWPPTQRTRDAVINRLIETLSTPSVLSKRYGTMPADEASAAARQIEDEAFAAAGGSAAADTDGIEILQVYSKEISKRMLDSVKSRATTGSAAADNGASDVPPSPSPAEEDAPPAADSET* 159
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g4125 158 MobiDBLite consensus disorder prediction 1 40 - -
Lja1g4125 158 PANTHER WPP DOMAIN-CONTAINING PROTEIN 1-RELATED 1 144 IPR044692 GO:0000278|GO:0048527
Lja1g4125 158 Gene3D WPP domain 37 131 IPR038214 -
Lja1g4125 158 PANTHER WPP DOMAIN-CONTAINING PROTEIN 1-RELATED 1 144 - -
Lja1g4125 158 Pfam WPP domain 37 128 IPR025265 -
Lja1g4125 158 MobiDBLite consensus disorder prediction 1 17 - -
Lja1g4125 158 MobiDBLite consensus disorder prediction 118 158 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g4125 Lja-Chr1 52309841 52310714 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g4125 - - lja:Lj0g3v0180959.1 231.491
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja1g4125 1 52309841 52310714 Lja1g4125 1 52309841 52310714 ECH
Lja5g3109 5 60775575 60776262 Lja1g4125 1 52309841 52310714 PCT