Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g4097 ATGGTGTTTGGGCAAGTAGTAATTGGTCCTCCTGGCTCTGGCAAAACAACTTATTGCAATGGCATGTCTCAGTTCCTTAATCTTATTGGAAGGAAGGTTGCTATTATCAATTTGGATCCCGCTAATGATTCATTACCCTATGAATGTGCTGCAAACATTGAAGATCTCGTGAAACTGAGTGATGTAATGGTCGAACATTCTCTTGGTCCTAATGGGGGTCTTGTGTATTGTATGGATTATTTAGAGAAAAATATTGATTGGTTGGAAGCAAAACTGAAACCTCTTATAAAAGATCACTACCTACTTTTTGATTTTCCTGGCCAAGTGGAACTCTTTTTTCTTCATTCAAATGCCAAGAATGTCATCATGAAGCTCATAAAGAAATTGAACCTAACGTTAACTGCAGTGCATTTGGTTGATGCTCATCTTTGCAGTGACCCTGGGAAGTACATCAGTGCATTGCTTCTATCCTTATCCACAATGCTACATTTAGAACTTCCCCATGTAAATGTCTTGTCAAAAATTGATTTAATTGAGAGCTATGGAAAACTAGCCTTTAACCTTGATTTCTATACAGACGTGCAAGACTTGTCATATTTGCAAAACCATCTCGATCAGGATCCTCGCTCTGCCAAGTACAGAAAGCTAACCAAGGAATTGTGTGAAGTTATTGAAAACTTCGGCCAAGTGACTTTTACAACCTTAGATATTCAGGATAGGGAGAGTGTAGGGAATTTAGTGAAGCAGATAGATCAAAGCAATGGGTACATATTTGCTGGCATGGAAGCAAGTGCTGTTGAATTTAGCAAGATTGCAATTCGTCCTGTTGATTGGGATTATTATAGAGTTGCAGCAGTGCAAGAGAAGTACATGAAGGATGATGAAAATATCGATTCTGATGATTGA 906 0.3841 MVFGQVVIGPPGSGKTTYCNGMSQFLNLIGRKVAIINLDPANDSLPYECAANIEDLVKLSDVMVEHSLGPNGGLVYCMDYLEKNIDWLEAKLKPLIKDHYLLFDFPGQVELFFLHSNAKNVIMKLIKKLNLTLTAVHLVDAHLCSDPGKYISALLLSLSTMLHLELPHVNVLSKIDLIESYGKLAFNLDFYTDVQDLSYLQNHLDQDPRSAKYRKLTKELCEVIENFGQVTFTTLDIQDRESVGNLVKQIDQSNGYIFAGMEASAVEFSKIAIRPVDWDYYRVAAVQEKYMKDDENIDSDD* 302
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g4097 301 CDD GPN2 3 252 - -
Lja1g4097 301 Pfam Conserved hypothetical ATP binding protein 7 255 IPR004130 -
Lja1g4097 301 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 6 254 IPR027417 -
Lja1g4097 301 Gene3D - 4 265 IPR027417 -
Lja1g4097 301 PANTHER GPN-LOOP GTPASE 2 1 294 IPR030231 -
Lja1g4097 301 PANTHER XPA-BINDING PROTEIN 1-RELATED 1 294 IPR004130 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g4097 Lja-Chr1 52013966 52019251 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g4097 K24104 - gmx:100781338 560.066
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja1g4097 1 52013966 52019251 Lja1g4097 1 52013966 52019251 ECH