Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g4093 ATGTCTAATGAAAACAATGCTGATGGTGCTGGTGATGGTGGCAACAAAAAACAGCAAAAGAATGAGAAGCCGCCGCAGGAACCGCAACCACATCCAGTGAAAGACCAGTTACCTGGAGTTCAGTACTGCATTAACAGTCCTCCTCCTTGGCCTGAAGCGTTTATATTGGCTTTCCAACATTACATTCTGACTCTTGGCATGACCGTTCTGATTCCATCTATGATTGTTCCTCAAATGGGAGGAGGCGATGCTGAAAAGGCCAAGGTGATTCAGAGTCTGTTGTTTGTTTCTGGACTGAGCACATTTCTTCAATCCTTGTTTGGGACTCGATTGCCAACTGTAGTTGTTGGTTCATACTCTTACATAATACCGACAATGTCAATTGTCCAAGCCAGCAGATACAGTTCACTTACAGATCCTTATGATAGGTTCACTCAGACGATTAGAGCTATCCAAGGTGCCTTGATCATAAGTGCATGTTTCCAAATGGTCATGGGATTCTTGGGCTTTTGGAGGAATGTTGTCAGGTTCCTTAGCCCACTTTCTGTAGTCCCTTATGCAACTTTTGCAGGCCTTGGTCTCTACCATCTTGGTTTCCCAATGCTGGCAAACTGTGTTGAGGTTGGGCTTCCAGCATTGATTGTTATGGTTTTCATCTCACAGTATCTTAATCGTTACATAAAGACCAAGAAGCCTGTATGTGACCGATTTGCAGTGTTGTTTTCTATTGCGATTGCATGGTTATTTGCACAACTTCTTACTTCAAGCACTGCATATGACCACAAGCCAGAAATTACACAGAAGAGTTGTCGCACTGATCGTGCTGGTCTAATGAGTGCTGCTCCATGGAAAGATTATGAACACATTACGGTATATTTTCCTTACCCTTTCCAATGGGGGAGTCCCACCTTCAACTCTGGGGAAGCTTTTGCTATGATAGCCGCTTCTTTTGTTTCTCTTTTTGAGTCTACTGGAGCATTTTATGCTGCGGCAAGATATGGAAGTGCAACACCTGTTCCACCTTCTGTTATCAGCCGTGGAACTGGCTGGGTGGGAGTAGCTTCTTTGCTCAATGCCATGTTTGGTTCTGTAACTGGAAGTACGGTATCAGTGGAAAATGCAGGATTATTGGCATTAACAAGAGTGGGAAGCCGAAGAGTCATCCAAATATCAGCTGGCTTTATGATTATTTTCTCTGTATTTGGAAAATTTGGAGCTTTTTTTGCTTCCATACCTTTGCCAATCATAGCAGCATTGTATTGTGTGTTCTTCGGCTATGTGTCTTCTGCGGGTCTTGGTTTTCTCCAGTTCTGCAACCTCAACAGTTTCAGAACCAAATTCGTGCTGGGCTTCTCCTTCTTCCTCGGCATCTCCGTACCACAATATTTCATTGAATATTATCAGCTAAAACATCACGATGCTAGATGGTTCACTGATTTCATGACTGTGATTTTCTCATCACACACAACGGTGGCTGCCTTGGTTGCTTTCATTTTGGATATCACACTTTCGCGTGAAGATGATAAAGCCAGTAATGACAGTGGTTTGAAATGGTGGGAGAAGTTCAGTATGTACACTACTGATGTTAGGAGCAATGAATTCTATGCTTTACCATGCAGACTCAATGAGCTTTTCCCAGCCCTTTAA 1647 0.4317 MSNENNADGAGDGGNKKQQKNEKPPQEPQPHPVKDQLPGVQYCINSPPPWPEAFILAFQHYILTLGMTVLIPSMIVPQMGGGDAEKAKVIQSLLFVSGLSTFLQSLFGTRLPTVVVGSYSYIIPTMSIVQASRYSSLTDPYDRFTQTIRAIQGALIISACFQMVMGFLGFWRNVVRFLSPLSVVPYATFAGLGLYHLGFPMLANCVEVGLPALIVMVFISQYLNRYIKTKKPVCDRFAVLFSIAIAWLFAQLLTSSTAYDHKPEITQKSCRTDRAGLMSAAPWKDYEHITVYFPYPFQWGSPTFNSGEAFAMIAASFVSLFESTGAFYAAARYGSATPVPPSVISRGTGWVGVASLLNAMFGSVTGSTVSVENAGLLALTRVGSRRVIQISAGFMIIFSVFGKFGAFFASIPLPIIAALYCVFFGYVSSAGLGFLQFCNLNSFRTKFVLGFSFFLGISVPQYFIEYYQLKHHDARWFTDFMTVIFSSHTTVAALVAFILDITLSREDDKASNDSGLKWWEKFSMYTTDVRSNEFYALPCRLNELFPAL* 549
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g4093 548 MobiDBLite consensus disorder prediction 1 38 - -
Lja1g4093 548 PANTHER NUCLEOBASE-ASCORBATE TRANSPORTER 10-RELATED 16 547 - -
Lja1g4093 548 MobiDBLite consensus disorder prediction 15 29 - -
Lja1g4093 548 Pfam Permease family 53 463 IPR006043 GO:0016020|GO:0022857|GO:0055085
Lja1g4093 548 PANTHER XANTHINE-URACIL / VITAMIN C PERMEASE FAMILY MEMBER 16 547 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g4093 Lja-Chr1 51993209 51997927 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja1g4093 26 547 Organic Solute Cotransporters AT1G65550 63.910 0.0 739
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g4093 - - tcc:18601939 833.943
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja1g4093 1 51993209 51997927 Lja1g4093 1 51993209 51997927 ECH