Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g4086 ATGGGCACTCTGATGAAGCAACCAGGTTTCATCTTCAAGATAGTGCTAGTGATGCTGCCATTGCTGCTATGCACATGCGGAGCAACCACCATTCTCAGCAGCAGCAACCTCCACCCATTGATTCTAATTCCAGGTAACGGAGGAAACCAACTAGAAGCCAGGTTAACCAATCAGTACAAACCCTCCAGCTTCATCTGTGAAACGTACCCACTTTTCAAGAAGAAAAACAGCTGGTTCAGGCTCTGGTTTGATTCTAGTGTTCTGCTTGGTCCTTTCACTCGATGCTTCGCTCGCCGCATGACACTTCATTACAACCCCGAGCTCGATGATTTCTTCAATACTCCTGGGGTTCAGACTCGGGTCCCTCACTTTGGTTCTACCAAATCTCTTCTTTATCTCAATCCTCGCCTCAAGCTTATCACTGAATACATGGCATCTCTGGTAGACTCACTAGAAGAGCTTGGTTATATTGATGGTGAAACTCTGTTTGGAGCCCCCTATGATTTTCGATACGGTCTAGCAGCTCCAGGTCACCCATCTCAAGTTGGGACCAAGTTCCTTAACGACCTGAAGAGTTTGATTGAAAAAGCAAGCATTTCCAATGGCGGGAAGCCAGTGATACTTGTCTCCCACAGCTTAGGAGGCCTATTTGTCCAACAACTCCTGAGTCGAAACCCCTCCTCTTGGTACAAGAAATACATCAAACACTTTGTAGCAATTTCTGCTCCATGGGGTGGTACTGTGGATGAAATGCTCACATTTGCATCTGGCAACACTCTTGGAGTGCCCCTAGTGGACCCCTTGTTAGTGAGAGATGAGCAAAGAAGCTCTGAGAGTAATCTATGGCTTTTGCCCAATCCCAAGATGTTTGATCCTCAAATGTCATTAGTAATCACTTCTAATAGAAGCTACTCTGCACATGACATGACTGATTTTCTCAAAGACATTGGTTTTCCTGAAGGTGTCTATCCTTATCAGACTCGGATTCTGCCCTTGATAGAGAATGTAGAAGCACCAGAAGTGCCTGTGACTTGTGTTATTGGGACGGGCATGAGAACTGCGGAGAGTTTGTTTTATAGAGATGGTAATTTTGATGAGCAACCGGAAATTTCTTATGGGGATGGTGATGGAACGGTGAACATGGTGAGCTTGTTGGCGCTTCAATCTCTGTGGAAAGATGAGAAAAATCTAGACCTGAAAGTGATTAAGATTGGTGGGGTGTCTCACACTTCAATACTAAAAGATGCAGGTGCACTTGATGAAATAATGGGTGAGATTTGTGGAATTAATGCTCAAGCTGAGCTTGGTATAACTATAAGCAATGCTCTTTCGGCATAA 1338 0.4469 MGTLMKQPGFIFKIVLVMLPLLLCTCGATTILSSSNLHPLILIPGNGGNQLEARLTNQYKPSSFICETYPLFKKKNSWFRLWFDSSVLLGPFTRCFARRMTLHYNPELDDFFNTPGVQTRVPHFGSTKSLLYLNPRLKLITEYMASLVDSLEELGYIDGETLFGAPYDFRYGLAAPGHPSQVGTKFLNDLKSLIEKASISNGGKPVILVSHSLGGLFVQQLLSRNPSSWYKKYIKHFVAISAPWGGTVDEMLTFASGNTLGVPLVDPLLVRDEQRSSESNLWLLPNPKMFDPQMSLVITSNRSYSAHDMTDFLKDIGFPEGVYPYQTRILPLIENVEAPEVPVTCVIGTGMRTAESLFYRDGNFDEQPEISYGDGDGTVNMVSLLALQSLWKDEKNLDLKVIKIGGVSHTSILKDAGALDEIMGEICGINAQAELGITISNALSA* 446
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g4086 445 Gene3D alpha/beta hydrolase 109 428 IPR029058 -
Lja1g4086 445 PANTHER BCDNA.GH02384 11 432 - -
Lja1g4086 445 SUPERFAMILY alpha/beta-Hydrolases 35 422 IPR029058 -
Lja1g4086 445 Pfam Lecithin:cholesterol acyltransferase 79 290 IPR003386 GO:0006629|GO:0008374
Lja1g4086 445 PANTHER LECITHIN-CHOLESTEROL ACYLTRANSFERASE-RELATED 11 432 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja1g4086 5 432 Acyl Lipid Metabolism Gene Families AT1G27480 59.028 0.0 513
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g4086 - - gmx:100804027 688.723
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja1g4086 1 51890172 51892284 Lja1g4086 1 51890172 51892284 ECH