Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g4075 ATGGCACCTTTGTTTGATTGGGGGGTGAAGGAACCACAGAGAGGAACCCCAGTGGTGGTGAAGATGCAGAATCCTAATTGGTCTATGGTTGAACTTGAGGGTCCTTCTGATGAAGATTTACTCATCACTGACCCTTCTTCAGCTGGGTCAAGAGATAAAGGAAGAGGCAAAAATGCTAAGCAGCTCACTTGGGTGCTTCTCCTTAAAGCTCATAGAGCTGCTGGTTGCTTAACCTCCATTGCTCCTGCAATGCTGGGTCTGGTTTCGGCTGTGAAGCGCCGCGTGGCTTCGGGGAGGACGGATGTTGATGCGGATAGTGAGGGTGGCGGAGGCAGGGAGAAGGAGAATCCTACTGTGAAGAGCAGATTCTATTTGTTCATCAAGGTGTTTTTATGGTTGTCTGTGATTCTGTTGTGTTTTGAGGTGGCTGCTTATTTTAAAGGTTGGCATCTTCAGTTGGAGTATTTGTTTTGGGCACCTGCATTTTGGGTTAAGGATTTTTTCGGTTGGGTTTACGCGCTGTGGGTTTTGATTCGTGTGGAGTATCTTGCTCCTCCATTGCAGCTCCTGACCTATGCTTGTATTGTGCTGTTCCTTATTCAGAGTTTGGATAGGTTGGTTCTTTGTTTAGGTTGTTTTTGGATCCGGTTTAAGAAGATCAAGCCTGTTCCGAAAGACGGTGCTGTAGATCTTGAATCTGGAGAGAAAGGTTTCTGCCCCATGGTACTAGTGCAGATCCCTATGTGCAATGAGAAAGAGGTTTATCAGCAATCAATTGCTGCTGTCTGTAATTTGGATTGGCCTAAGTCCAAGTTGTTAATTCAAGTTCTTGATGATTCTGATGATCCTACAACACAGTCGTTGATCAACGAGGAGGTCCAAAAATGGCAGCAAGAGGGTGCCAACATTTTGTACCGGCACCGGGTGATCAGGGATGGGTACAAGGCCGGTAATTTGAAATCTGCAATGAATTGTAACTATGTGAAAGACTATGAGTTCGTTGCAATTTTTGATGCCGATTTCCAACCTACCCCAGATTTCCTTCGAAAAACTGTTCCTCATTTTAAGGATAATGATGAATTAGGACTTGTTCAAGCAAGATGGTCCTTTGTGAATAAGGATGAGAACCTGCTAACAAGGTTGCAGAACATTAATTTGTCCTTCCATTTTGAGGTGGAACAGCAAGTCAATGGGATTTTCATCAATTTCTTTGGGTTCAATGGAACGGCTGGAGTGTGGAGAATAAAGGCTTTGGAGGATTCTGGTGGTTGGTTGGAGAGGACCACCGTGGAGGACATGGACATTGCCGTTCGAGCTCATCTTCATGGCTGGAAATTTGTTTTCCTCAATGATGTTGAGTGCCAATGTGAGCTACCCGAATCTTATGAAGCTTACAGGAAACAGCAGCATAGATGGCATTCTGGGCCAATGCAATTGTTCCGCCTTTGTTTGCCTGATATCATAAGGTCCAAGATAAGCATATGGAAGAAATTCAATATGATATTTCTGTTCTTTCTCCTTAGAAAACTGATATTACCATTCTATTCATTCACCCTTTTTTGCATAATACTGCCTATGACAATGTTTGTCCCGGAAGCTGAGATTCCGGCATGGGTTGTTTGTTACATCCCTGCTGCCATGTCATTTCTCAACATTCTTCCTGCTCCAAAAGCTTTCCCTTTCATTGTTCCTTATCTCCTATTTGAGAACACCATGTCAGTTACCAAATTCAATGCCATGATCTCTGGCCTGTTCCAGCTCGGGAGTGCATACGAGTGGGTGGTTACTAAAAAATCCGGCCGTTCCTCGGAGGGTGATCTGGCTTCATTGGTTGAGAAAGGGCCAAAGCCTCAAAGAGGAGCCTCAGCACCTGATCTCGAGGAAATGAAAGAGGAATTTCGAAGGCAGGAGGAGGAGGAAAAGGGGTCTAGGTCTAAGAAGAAGAAAAAGCATAACAGAATATATATGAAGGAGCTTGCTTTGGCCTTTCTACTTCTAACAGCCTCAGCTAGGAGTCTCCTCTCTGCTCAGGGGATCCACTTCTACTTCTTGCTATTTCAGGGTGTATCATTTCTACTAGTTGGCCTAGACTTGATTGGTGAACAAGTGGACTGA 2115 0.4454 MAPLFDWGVKEPQRGTPVVVKMQNPNWSMVELEGPSDEDLLITDPSSAGSRDKGRGKNAKQLTWVLLLKAHRAAGCLTSIAPAMLGLVSAVKRRVASGRTDVDADSEGGGGREKENPTVKSRFYLFIKVFLWLSVILLCFEVAAYFKGWHLQLEYLFWAPAFWVKDFFGWVYALWVLIRVEYLAPPLQLLTYACIVLFLIQSLDRLVLCLGCFWIRFKKIKPVPKDGAVDLESGEKGFCPMVLVQIPMCNEKEVYQQSIAAVCNLDWPKSKLLIQVLDDSDDPTTQSLINEEVQKWQQEGANILYRHRVIRDGYKAGNLKSAMNCNYVKDYEFVAIFDADFQPTPDFLRKTVPHFKDNDELGLVQARWSFVNKDENLLTRLQNINLSFHFEVEQQVNGIFINFFGFNGTAGVWRIKALEDSGGWLERTTVEDMDIAVRAHLHGWKFVFLNDVECQCELPESYEAYRKQQHRWHSGPMQLFRLCLPDIIRSKISIWKKFNMIFLFFLLRKLILPFYSFTLFCIILPMTMFVPEAEIPAWVVCYIPAAMSFLNILPAPKAFPFIVPYLLFENTMSVTKFNAMISGLFQLGSAYEWVVTKKSGRSSEGDLASLVEKGPKPQRGASAPDLEEMKEEFRRQEEEEKGSRSKKKKKHNRIYMKELALAFLLLTASARSLLSAQGIHFYFLLFQGVSFLLVGLDLIGEQVD* 705
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g4075 704 Coils Coil 626 646 - -
Lja1g4075 704 PANTHER XYLOGLUCAN GLYCOSYLTRANSFERASE 12-RELATED 6 703 - -
Lja1g4075 704 Pfam Glycosyl transferase family group 2 334 528 IPR001173 -
Lja1g4075 704 MobiDBLite consensus disorder prediction 623 645 - -
Lja1g4075 704 SUPERFAMILY Nucleotide-diphospho-sugar transferases 242 519 IPR029044 -
Lja1g4075 704 PANTHER - 6 703 - -
Lja1g4075 704 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 234 457 IPR029044 -
Lja1g4075 704 MobiDBLite consensus disorder prediction 606 649 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g4075 Lja-Chr1 51733189 51737172 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja1g4075 1 704 Miscellaneous Gene Families AT4G07960 77.361 0.0 1078
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g4075 - - gmx:100805969 1204.5
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja1g4075 1 51733189 51737172 Lja1g4075 1 51733189 51737172 ECH