Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g4057 ATGAAGAGAGGGAAAGATGATGAGAAGGTTATGGGGCCATTGTTCCCTAGACTCCATGTTAGTGATACAGAGAAGGGAGGGCCAAGAGCACCACCAAGGAACAAGATGGCCCTCTATGAGCAGTTTAGTATTCCCTCTCAAAGGTTCAACCAAGGCCTTCTGCCTCCCACCAACACAAACACTTCTAGTAATACAGCTCCCCCAGCATCCTCAAGCCAGGGGGCTGTACATGAGAGAAATTATGTCTTCCCTGTTCAATCGCCTTCACAGACCCCTATTCGTCGCGCTGAAAAACCTGTTTCTCACCAATCCGAAGGGGCAAATCTGAATTCTTCATTGGTTCAACTTGAGCAGAGGAAGAAGGTGGACGAAGATGACTTTACAGTTCCGATATACATTCGTTCAAGGACTGGTCAATCTAGTGATCGAAGTCTTGATGGGAAAAGGCTCAGGTATTTTGGTTGTTCAGTAGCAGAGCAAAATGATTGTGAAAGGGATCTGAAACAGTATGCTCCCTCACTTGTCAATAAGAGAAGAGATGTAAGAAGCGAAACTGATGGTCTTCCACCAGTAAGTCCAAATAAGGAGCAGCCGTTAATACGTGCCAGAAACACATCAACTGGAGAAAATATTGACACCTTCAAAAGGCAAGCCAAGGTGACTCCAAATCAAGAGTTTCAAGATTGTACTCTGTCAAAACCTACCAGATTACAACGAGATGATGCTTGCTTACGGCGGGACTGTGAAGCTGTGTCGCAATCCAATGGCATTGGACAAAGTGGTGGTCTTGTCGAGTCTACTCCAGAGACAGACAAGAGAAATGCGCCTACAGAAAGCCAAACCAGTCCAGGTGAGGCTATCAATGACACTGAATATCAGAATACTAGGCCTGGCTGTCCAATACGGAGAGGAAGTTTGAACAAAAGTGGCAATGTTTCCAAGATCTCGAGGGTAGAAAATTTGTCAACCCTAAAAGTTTCTCCTGATGATGTTGTTGGACTAATCGGTCAAAAACATTTCTGGAAAGCCCGAAGAGCAATTGTCAATCAACAGAGAGTGTTTGCAGTCCAAGTGTTTGAATTGCATAGACTGATAAAGGTCCAACAGCTGATTGCTGGATCACCAGATCTTATGCTTGTAGATGGTGCTTTTCTCAGAAAGTCTCCTCCAAAGGGATCTACTCCCAAGAAACTCTCATTGGAATATGTGGTTAAACCTCTGCAAGAAAACCTTAAGCGCAATGATTCTGAAAAGCAAAATCATAAAATGGAATGTTCTGCAGAAAATGCAGTTGGTAAAACATCTATTTCATCGGTGAAAAATGGTAGCCACCTTTCACACCACACCCCTTTTCCCGGGAATCCACCCCAGCCTAATGTGCCTGCCGACAGTGGGATGAGTCCTTGGGGTTTCCATCAGTCACCTGGGCACCAATGGTTAATTCCTGTGATGTCTCCTTCCGAAGGGCTCATCTACAAGCCATATCCCGGGCCTGGATATACAGGAACAAATGGTGGAGGATGTGGGCCTTTTGGGCCTGCTCCTTTGGGTGGTACTTTCATGAATGCTGCCTATGGAATCCCAAATTCTTACCAAGGGATCGGGGTTCCACCAGACGCTCCTCCGGGCAGCCATGCTTATTTCCCTCCCTATGGCATGCCGACTATGAATGCAGCAATGTCAGAGTCAGCTGTTGATCAGGTGAACCAGTTTTCTGCCCTAGAATCTCGGGGGCAAAGTGGCCATATTTCTGGCAGGGAAGCTGATCATAACACACACAATCAGAGTTCATGTGATGTACCAGTGCAGGGAAATGGAGCAACATCACATGTCATGTATCAGCAGATGTACAAGGAGTTTGAGTTACAGGGGAGTAGGACAAGTAGCCCTAGTGAAATGGGGCAAGTTGCTGAAGGAAGAGATGCGCTTCCTCTTTTCCCTACAGTTCCAGTAGAACCAGAGGGAGCCCCTCAGTCTCTTGAAACTGGACAACAAATTCGAGTTATCAAAGTGGTGCCTCACAACCGAAGATCTGCAACTGCATCAGCAGCTAGAATATTTCAATCGATCCAAGAAGAGAGAAAACAGTATGACTAA 2097 0.4592 MKRGKDDEKVMGPLFPRLHVSDTEKGGPRAPPRNKMALYEQFSIPSQRFNQGLLPPTNTNTSSNTAPPASSSQGAVHERNYVFPVQSPSQTPIRRAEKPVSHQSEGANLNSSLVQLEQRKKVDEDDFTVPIYIRSRTGQSSDRSLDGKRLRYFGCSVAEQNDCERDLKQYAPSLVNKRRDVRSETDGLPPVSPNKEQPLIRARNTSTGENIDTFKRQAKVTPNQEFQDCTLSKPTRLQRDDACLRRDCEAVSQSNGIGQSGGLVESTPETDKRNAPTESQTSPGEAINDTEYQNTRPGCPIRRGSLNKSGNVSKISRVENLSTLKVSPDDVVGLIGQKHFWKARRAIVNQQRVFAVQVFELHRLIKVQQLIAGSPDLMLVDGAFLRKSPPKGSTPKKLSLEYVVKPLQENLKRNDSEKQNHKMECSAENAVGKTSISSVKNGSHLSHHTPFPGNPPQPNVPADSGMSPWGFHQSPGHQWLIPVMSPSEGLIYKPYPGPGYTGTNGGGCGPFGPAPLGGTFMNAAYGIPNSYQGIGVPPDAPPGSHAYFPPYGMPTMNAAMSESAVDQVNQFSALESRGQSGHISGREADHNTHNQSSCDVPVQGNGATSHVMYQQMYKEFELQGSRTSSPSEMGQVAEGRDALPLFPTVPVEPEGAPQSLETGQQIRVIKVVPHNRRSATASAARIFQSIQEERKQYD* 699
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g4057 698 MobiDBLite consensus disorder prediction 273 295 - -
Lja1g4057 698 PANTHER PROTEIN EARLY FLOWERING 3 1 698 IPR039319 GO:2000028
Lja1g4057 698 PANTHER FLOWERING PROTEIN, PUTATIVE-RELATED 1 698 - -
Lja1g4057 698 MobiDBLite consensus disorder prediction 179 208 - -
Lja1g4057 698 MobiDBLite consensus disorder prediction 576 596 - -
Lja1g4057 698 MobiDBLite consensus disorder prediction 438 465 - -
Lja1g4057 698 MobiDBLite consensus disorder prediction 253 308 - -
Lja1g4057 698 MobiDBLite consensus disorder prediction 1 76 - -
Lja1g4057 698 MobiDBLite consensus disorder prediction 253 267 - -
Lja1g4057 698 MobiDBLite consensus disorder prediction 40 76 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g4057 Lja-Chr1 51377100 51382019 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g4057 K12125 - gmx:100793561 934.48
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja1g4057 1 51377100 51382019 Lja1g4057 1 51377100 51382019 ECH