Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g4056 ATGAGAAATCGTAAGGTAACAATCTTGTTCCTTTGGGCAATGTTGGCCTTATGCACCATACTCGAATTGAAAGTTCAAGTAAGAGCATCTTCTCCTTTAGAAAGTGAAATAGAAGCTAAATTGAAGCTTCTCAACAAACCTGCGGTAAAAACAATTAAGAGTGAAGATGGAGATATTATTGACTGCATCGATATCTATAAGCAACCTGCTTTTGATCACCCTGTATTAAAAAACCACACTATCCAGAGTATACCCAGTTTCCTACTAGAGTCCCAGAATTCAAGCACTAAGGATACATTCCAAGCAGAGACAAATGTCTTTCAAACATGGCAAAAAAGTGGAAGTTGTCCAAAAGGAACTGTCCCCATTCGTAGAATTCGAAGAGAGGATTTACTGAGGTTTGATTCTCTGGACAGCTTTGGACAAAAACCCAGAGCATCATTCATGAATTCAACAAAGACCCTAAGCTCTCATTTCCCAAAACTCAATGGCAGTAAAGTTGTTATTCCAGAAAATCACTCGGCATCATATCTTGTGACAGTGGGATACCATTACATAGGTGCACAAGCAGATATCAACATTTGGAATCCAAGGGTTGATCTCCCAGAAGATTTCACCACTGCTCAAATTTGGCTTAAGACTGGAAATGGTCCTAATTTTGAAAGTGTTGAAGCAGGCTGGGTGGTGAATCCAAAGCTATTTGGTGACAGAGCCACTCGGTTTTTTAACTATTGGACTAAGGATTCGTACCTGTCAACGGGTTGCTTTGATGTTACTTGTCCTGGGTTTGTGGTAACAGGCCAAGTAGCACTTGGTGGTGCCATAAAACCCGTGTCGTCCACAAGAGGGACCCAGTATGATCTCACCGTTGGAATGTTTTTGGATCCTATCACAAAGAACTGGTGGCTTAAAGTGAAGAATAACATTGTTGTAGGTTATTGGCCCGCCATATTATTTGACGAATTGACTCAGAGTGCCACTATTGTTGAGTGGGGAGGACAAGTGTTCAGTCCGATGGTAAAGCAAACCCCTCACACAAAAACAGGGATGGGGAGTGGGGATTTTGCCAATGGATTATTCGGCAATGCATGCTACATGAGGAATATCAGAATTAAGGATTACTCACTTAAACTCAAGTACCCTGAGTTTGTAAGACCAGTGACTGAAGAACAATACTGCTACAATGTTCTCAACGATGTTAAATATGGAAAAGAACCTTACTTCTATTTTGGAGGGCCTGGACAAAGACCTCCTTACTGTCCTTAA 1266 0.4115 MRNRKVTILFLWAMLALCTILELKVQVRASSPLESEIEAKLKLLNKPAVKTIKSEDGDIIDCIDIYKQPAFDHPVLKNHTIQSIPSFLLESQNSSTKDTFQAETNVFQTWQKSGSCPKGTVPIRRIRREDLLRFDSLDSFGQKPRASFMNSTKTLSSHFPKLNGSKVVIPENHSASYLVTVGYHYIGAQADINIWNPRVDLPEDFTTAQIWLKTGNGPNFESVEAGWVVNPKLFGDRATRFFNYWTKDSYLSTGCFDVTCPGFVVTGQVALGGAIKPVSSTRGTQYDLTVGMFLDPITKNWWLKVKNNIVVGYWPAILFDELTQSATIVEWGGQVFSPMVKQTPHTKTGMGSGDFANGLFGNACYMRNIRIKDYSLKLKYPEFVRPVTEEQYCYNVLNDVKYGKEPYFYFGGPGQRPPYCP* 422
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g4056 421 Gene3D - 191 310 - -
Lja1g4056 421 PANTHER ASLB (DUF239)-RELATED 17 417 - -
Lja1g4056 421 Pfam Neprosin 203 413 IPR004314 -
Lja1g4056 421 Pfam Neprosin activation peptide 51 149 IPR025521 -
Lja1g4056 421 PANTHER PROTEIN, PUTATIVE (DUF239)-RELATED-RELATED 17 417 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g4056 Lja-Chr1 51370217 51374589 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g4056 - - gmx:100804570 561.607
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja1g4056 1 51370217 51374589 Lja1g4056 1 51370217 51374589 ECH