Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g4055 ATGAAAAAATTTAAAGTTGTAATTTTGTTTATATGGGCGTTGTTTGCCTCCTGTACCCAGGTAGATTTCAAAGTTGTGGCAACAGCATCATCTCCTACAAAAAGAGAAATAAAAGCTAAATTGAAGCTCCTCAACAAGCCTTCCGTAAAAACCATCAAGAGTGAAGATGGAGATATAATTGACTGTGTCGACATATATAAACAATCTGCTTTTGACCATCCTGCACTAAAAGACCACAAATTACAGAAAATTCCCGATTTTCTTATAGAATCCAAGAACTCAAGCAATTTGCAAACAAAGTCCATTGTGTTCCAAACATGGCAGAAAAATGGAAGTTGTCCAGAAGGAACAATTCCCATTCGCAGGATTCGAACGGAGGATTTATCAAGGGCAGCTTCCCTGAATCTTTTCGGACGAAAACCCATAATGCATTTCATGAAATCAACAAACAACACAAACTCTAATTACCCCATAGTCAATGGCTCATTTGCATATGTTCCAGAAAACCGCACGAAAGCATTTCTTGTGACAGTGGGATACAGTTATATTGGTGCAGAAGCTGAAATTAACGTTTGGAATCCAAGGGTTGATCTTCCAGATGATTTCACCACTGCTCAAATTTGGCTTAAGACTGGAAATGGTCCTCAATATTTTGAAAGCATTGAATCAGGCTGGCAGGTAAATCCAAAGTTGTATGGTGACAGGTCCACTCGATTTTTTGCTCATTGGACTACAGATTCATACAAGTCAACAGGTTGTTTTGATGTTGTTTGTCCTGGGTTTGTGCAAGTAGGCCAAGTAGTTCTTGGAGGTGCAATAACACCTATTTCATACTCATACCACACACAAAAAGAAATCCCCGATAACTCAGGGAATTGGTGGCTTAAAGTGAACAATCATATTGTAGGTTATTGGCCTGCAAAATTATTAAGTGGGTTGAGTCGCAGTGCCAAATCAGTTGAGTGGGGAGGACAAGTGTACAGTCCAATGTTGAAGAAAAATACACCTCACACGAGGACAGCTATGGGAAGTGGAGAGGCTGCAGATGGTCGTTGGGGGAACGCATGCTACATGCGCAATCTAAGAATTAAAGATTACTCCCGAAATCTTAAGTACCCTGAATATGTAAGCACAAGGGCTGAAGAACCATATTGCTACAATGTCATCAATGAGGCCAAATATGGGCAGGAACCTATCCTCTACTTTGGAGGGCCCGGATTTAAACCTCCCTATTGCCCTTGA 1242 0.4058 MKKFKVVILFIWALFASCTQVDFKVVATASSPTKREIKAKLKLLNKPSVKTIKSEDGDIIDCVDIYKQSAFDHPALKDHKLQKIPDFLIESKNSSNLQTKSIVFQTWQKNGSCPEGTIPIRRIRTEDLSRAASLNLFGRKPIMHFMKSTNNTNSNYPIVNGSFAYVPENRTKAFLVTVGYSYIGAEAEINVWNPRVDLPDDFTTAQIWLKTGNGPQYFESIESGWQVNPKLYGDRSTRFFAHWTTDSYKSTGCFDVVCPGFVQVGQVVLGGAITPISYSYHTQKEIPDNSGNWWLKVNNHIVGYWPAKLLSGLSRSAKSVEWGGQVYSPMLKKNTPHTRTAMGSGEAADGRWGNACYMRNLRIKDYSRNLKYPEYVSTRAEEPYCYNVINEAKYGQEPILYFGGPGFKPPYCP* 414
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g4055 413 PANTHER ASLB (DUF239)-RELATED 20 408 - -
Lja1g4055 413 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 18 - -
Lja1g4055 413 Pfam Neprosin 200 405 IPR004314 -
Lja1g4055 413 Pfam Neprosin activation peptide 51 149 IPR025521 -
Lja1g4055 413 PANTHER PROTEIN, PUTATIVE (DUF239)-RELATED-RELATED 20 408 - -
Lja1g4055 413 Gene3D - 191 298 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g4055 Lja-Chr1 51328458 51332003 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g4055 - - gmx:100804570 486.108
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja5g3031 5 59291337 59295427 Lja1g4055 1 51328458 51332003 PCT