Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g4052 ATGTCCATGGACCGCAATCCATTAATACTCACCCTCCTCTTTCTCATCGCCACCGTCGTCGCCGGTGGCCGTGACCTCCCCGGCGATGTTCTCCGATTACCCTCTCAAGCTTCCAGGTTTCTCAAACCATCTTCCGCCGACGAAAACGAGGGGACTAGGTGGGCAATTCTGATTGCCGGTTCCAATGGCTACTGGAATTACAGACACCAGGCTGATGTTTGTCACGCGTATCAACTGCTGAGGAAAGGTGGCTTGAAAGAAGAGAACATTATTGTTTTCATGTATGATGACATTGCTTTCAATGAAGAGAACCCGCGGCCTGGAGTCATCATTAATAGCCCACATGGAAATGATGTTTACGAGGGAGTTCCTAAGGATTACACTGGGGATGAGGTTACTGTTAACAACTTCTTTGCTGCTATACTTGGAAATAAGTCGGCTGTTACAGGTGGCAGTGGGAAGGTTGTTGATAGTGGTCCTGATGATCATATATTTATATACTACAGCGATCATGGGGGTCCAGGGGTCCTTGGAATGCCCACTAATCCTTACTTGTATGCATCTGATCTGATTGAAGTCTTGAAGAAGAAGCATGCTTCTGGAACATATAAAAGCCTAGTATTTTATCTAGAGGCTTGTGAATCTGGGAGTATCTTTGAAGGTCTTCTTCCTGAAGGTTTGAATATTTATGCTACAACAGCTTCAAATGCGGAAGAAAGCAGTTGGGGAACATATTGTCCTGGAGAGAATCCTAGTCCTCCGCCAGAATATGAAACCTGCCTGGGTGACCTGTACAGTGTTGCGTGGATGGAAGACAGTGATATACACAATTTGCGATCAGAAACTCTGCACCAACAATACCAATTGGTGAAACAAAGGACTATGAATGGAAATACAATCTATGGTTCCCATGTGATGCAATATGGTGACATAAGGGTTAGCAAGAATAGTCTCTTCCTATATTTGGGTACAAATCCTGCTAATGATAATTTTACTTTTGTGGATAAAAACTCATTGGTGCCACCTTCAAAAGCAGTCAATCAACGTGATGCAGATCTCGTCCATTTCTGGGATAAGTTCCGCAAAGCCCCTGAGGGTTCTCCTAGGAAAGCTGCAGCTGAGAAAGAAGTTATGGAAGCAATGTCACACAGAATGTATATAGACGACAGCATGAAACTTGTTGGGAAGCTCTTATTTGGCATGGAAAAGGGTCCAGAAGTGCTCAGCAGTGTTAGACCTGCCGGGCAACCACTTGTTGATGACTGGGACTGCCTTAAAACTCTGGTTAGGACTTTTGAGACATATTGTGGATCCCTTTCTCAGTATGGGATGAAACACATGAGGTCCTTTGCAAACTTCTGCAACGCAGGAATACAGAAAGAGCAAATGGCTGAGGCCTCGGCACAAGCATGCGTCAGTGTTCCATCCAGTCCCTGGAGTTCTCTGCAAAGGGGTTTCAGCGCATAA 1467 0.4513 MSMDRNPLILTLLFLIATVVAGGRDLPGDVLRLPSQASRFLKPSSADENEGTRWAILIAGSNGYWNYRHQADVCHAYQLLRKGGLKEENIIVFMYDDIAFNEENPRPGVIINSPHGNDVYEGVPKDYTGDEVTVNNFFAAILGNKSAVTGGSGKVVDSGPDDHIFIYYSDHGGPGVLGMPTNPYLYASDLIEVLKKKHASGTYKSLVFYLEACESGSIFEGLLPEGLNIYATTASNAEESSWGTYCPGENPSPPPEYETCLGDLYSVAWMEDSDIHNLRSETLHQQYQLVKQRTMNGNTIYGSHVMQYGDIRVSKNSLFLYLGTNPANDNFTFVDKNSLVPPSKAVNQRDADLVHFWDKFRKAPEGSPRKAAAEKEVMEAMSHRMYIDDSMKLVGKLLFGMEKGPEVLSSVRPAGQPLVDDWDCLKTLVRTFETYCGSLSQYGMKHMRSFANFCNAGIQKEQMAEASAQACVSVPSSPWSSLQRGFSA* 489
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g4052 488 PIRSF Legumain 2 488 IPR001096 GO:0006508|GO:0008233
Lja1g4052 488 Pfam Peptidase C13 family 53 323 IPR001096 GO:0006508|GO:0008233
Lja1g4052 488 Gene3D - 51 347 - -
Lja1g4052 488 Gene3D - 348 475 IPR046427 -
Lja1g4052 488 PIRSF AE 2 488 IPR043577 GO:0004197|GO:0051603
Lja1g4052 488 PANTHER HEMOGLOBINASE FAMILY MEMBER 7 487 IPR001096 GO:0006508|GO:0008233
Lja1g4052 488 PRINTS Hemoglobinase (C13) cysteine protease signature 154 173 IPR001096 GO:0006508|GO:0008233
Lja1g4052 488 PRINTS Hemoglobinase (C13) cysteine protease signature 79 108 IPR001096 GO:0006508|GO:0008233
Lja1g4052 488 PRINTS Hemoglobinase (C13) cysteine protease signature 54 78 IPR001096 GO:0006508|GO:0008233
Lja1g4052 488 PRINTS Hemoglobinase (C13) cysteine protease signature 203 219 IPR001096 GO:0006508|GO:0008233
Lja1g4052 488 PRINTS Hemoglobinase (C13) cysteine protease signature 126 141 IPR001096 GO:0006508|GO:0008233
Lja1g4052 488 PANTHER VACUOLAR-PROCESSING ENZYME 7 487 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g4052 Lja-Chr1 51293879 51307879 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g4052 K01369 - gmx:100791675 880.937
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja1g4052 1 51293879 51307879 Lja1g4052 1 51293879 51307879 ECH