Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g4048 ATGAACGCAGTAGCAGCAGCTTCTTCTTCGTATTCTGCACTTCTCCCCAACCCTAACAACCACTTTCAAAATCGGAATTCCTCATCGTCATGTTCGGATATCCGGAACATTGCATTTGTCACTTGCCACTCGAATGCTAATAAGTCTACATCACAAGCATCCTTGTTTTTGTGTCCCGGCTCGACGAATAGGAATGGCGCGCTTGCAGGACCTTTTTCTAGGAACCTCTCTGGCAGGAGAAATCTTGTTTGTCAGACAAATTATTCTGTGAATACAAGCACGACGTATGATGGGACTGCGTTAGAATCTCCCTCCCGTGTTGTGGAAGAGAAAGTTGGGGTCTTGCTTCTCAACCTAGGAGGGCCGGAGACGCTCAATGATGTTCAACCTTTTCTGTTTAATCTTTTTGCAGATCCCGATATCATTCGTCTCCCGAGGTTGTTTCGGTTTCTCCAGCGACCATTGGCAAAATTGATTTCTACGCTTCGGGCTCCTAAATCCAAGGAAGCGTATGCTTCTATTGGAGGTGGTTCTCCTTTACGCAAAATTACCGATGACCAGGCACTGGCAATTAAAAAGGCTTTGGAAGCAAAGGGTCTCTCTTCAAGTGTCTATGTTGGGATGAGGTACTGGTACCCATTCACAGAAGATGCAGTTCAGCAAATTAAGAGGGATGGAATAACAAGGCTTGTGGTATTACCCCTTTATCCCCAATTTTCTATATCTACAACTGGGTCAAGCATCCGTGTCCTCCAGCATATGTTCAGGGAAGATGCTTATTTGTCCCAGCTTCCTATTTCTATTGTAAACTCTTGGTATCAACGAGAAGGTTACGTTAAGTCAATGGCTGACTTAATTGAGAAAGAGCTCCAGACTTTTTCTGAGCCAAAGGAGGCAATGATATTTTTCAGTGCACATGGTGTGCCTGTCAGTTATGTTGAGAATGCTGGGGATCCGTACCAAGTTCAAATGGAGGAGTGCATCTTCTTGATCATGCAGGAGTTAAAAGCTAGAGGAATTAGTAATGAGCACACTCTTGCCTATCAGAGTCGAGTCGGTCCTGTACAGTGGCTGAAACCATATACAGATGAAGTTCTCGTTGAGCTTGGCAAGAAAGGTGTGAAGAGTCTTTTAGCTGTTCCAGTGAGCTTTGTGAGTGAGCATATTGAGACCCTTGAAGAAATTGACATGGAGTACAAGGAGTTGGCTCTTGAATCTGGTGTCAAGAATTGGGCACGTGTCCCTGCCCTCGGCCTTACCCCTTCCTTCATTACTGATCTGGCTGATGCAGTAATAGAAGCTCTCCCATCAGCAACAGCAATGTATGCACCGAGCCACACCAATGAAGATGTTGAACAAGACCCAGTTAGATTTTTTGTCAAGATGTTCTTTGGTTCAATCTTTGCTTTCTTCTTGTTTTTGTCACCAAAAATGATAAATGCCTTCAAGAATCATGTCATTTAG 1464 0.4419 MNAVAAASSSYSALLPNPNNHFQNRNSSSSCSDIRNIAFVTCHSNANKSTSQASLFLCPGSTNRNGALAGPFSRNLSGRRNLVCQTNYSVNTSTTYDGTALESPSRVVEEKVGVLLLNLGGPETLNDVQPFLFNLFADPDIIRLPRLFRFLQRPLAKLISTLRAPKSKEAYASIGGGSPLRKITDDQALAIKKALEAKGLSSSVYVGMRYWYPFTEDAVQQIKRDGITRLVVLPLYPQFSISTTGSSIRVLQHMFREDAYLSQLPISIVNSWYQREGYVKSMADLIEKELQTFSEPKEAMIFFSAHGVPVSYVENAGDPYQVQMEECIFLIMQELKARGISNEHTLAYQSRVGPVQWLKPYTDEVLVELGKKGVKSLLAVPVSFVSEHIETLEEIDMEYKELALESGVKNWARVPALGLTPSFITDLADAVIEALPSATAMYAPSHTNEDVEQDPVRFFVKMFFGSIFAFFLFLSPKMINAFKNHVI* 488
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g4048 487 Gene3D - 273 416 - -
Lja1g4048 487 TIGRFAM hemH: ferrochelatase 109 434 IPR001015 GO:0004325|GO:0006783
Lja1g4048 487 PANTHER FERROCHELATASE-1, CHLOROPLASTIC/MITOCHONDRIAL 44 486 - -
Lja1g4048 487 CDD Ferrochelatase_N 112 274 IPR033659 -
Lja1g4048 487 Hamap Coproporphyrin III ferrochelatase [cpfC]. 110 435 IPR001015 GO:0004325|GO:0006783
Lja1g4048 487 Gene3D - 111 435 - -
Lja1g4048 487 Pfam Ferrochelatase 111 434 IPR001015 GO:0004325|GO:0006783
Lja1g4048 487 PANTHER FERROCHELATASE 44 486 IPR001015 GO:0004325|GO:0006783
Lja1g4048 487 CDD Ferrochelatase_C 282 418 IPR033644 -
Lja1g4048 487 ProSitePatterns Ferrochelatase signature. 301 320 IPR019772 GO:0004325|GO:0006783
Lja1g4048 487 SUPERFAMILY Chelatase 110 442 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g4048 Lja-Chr1 51265904 51269146 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g4048 K01772 - gmx:100813423 766.918
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja1g4048 1 51265904 51269146 Lja1g4048 1 51265904 51269146 ECH