Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g4039 ATGACTGAACCAACCACCAAACCCAACGGCCTAGTTAACGGCGTCGCCGCCACCAACGGCAACCCCGGCGGCCCTGTGAAAAACCAGCTCTACAACCCCAACCGCCAAATGTACCGTCCCCAGTCGCACTACAACCGCCGCCACCGCTCCAACCGGAGCCTCTGTTGCTGCTGCTGCTTCTGGACAATCCTCATCCTCCTCTTCGCCGCGCTCGCCGCCGCCATTGTCGGCGCGGCACTCTACGTCCTCTACCGCCCTCACCGCCCGGAATTCTCCATCACCAACCTCCGCATTGCCAAGATGAACCTCACCACCTCCGCCGACTCGCCGCCGCACCTCACCACACTCTTCAACCTCACCCTCATCGCGAAGAATCCCAACAACCACCTTATCTTCTTCTACGAGCCGTTCTCCGTCACCGCGTTCTCAGATTCCGTGCAAATCGGTAACGGGTCGCTCACCGCGTTCGGGTCCGACAAGAACAACCAGACGAGCCTCCGTGCGGTGGTTTCCGGGTCGCAGGATCTGGACACGGAGTCGCTGAGTAGCTTGAGATCGGGGTTGAAGGCGAGGAAGGGGTTTCCGGTGACGATTCAGATGGATACGAAGGTGAAGATGAAGATGGAGTGGCTGAAGAGCAAGAAGGTGGGGATTCGAGTGAGGTGTACCGGAATCAGAGGGACGGTGCCCGCCGGAAAGTCGCCGGCGGTGGCTTCCGTTATCAACTCTGAATGTAAGGTGGATCTTCGAATCAAGATCTGGAAATTCTCATTCTAG 777 0.5856 MTEPTTKPNGLVNGVAATNGNPGGPVKNQLYNPNRQMYRPQSHYNRRHRSNRSLCCCCCFWTILILLFAALAAAIVGAALYVLYRPHRPEFSITNLRIAKMNLTTSADSPPHLTTLFNLTLIAKNPNNHLIFFYEPFSVTAFSDSVQIGNGSLTAFGSDKNNQTSLRAVVSGSQDLDTESLSSLRSGLKARKGFPVTIQMDTKVKMKMEWLKSKKVGIRVRCTGIRGTVPAGKSPAVASVINSECKVDLRIKIWKFSF* 259
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g4039 258 MobiDBLite consensus disorder prediction 1 27 - -
Lja1g4039 258 PANTHER LATE EMBRYOGENESIS ABUNDANT (LEA) HYDROXYPROLINE-RICH GLYCOPROTEIN FAMILY 7 257 - -
Lja1g4039 258 PANTHER HARPIN-INDUCED PROTEIN 7 257 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g4039 Lja-Chr1 51185173 51186333 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja1g4039 33 251 EF-hand Containing Proteins AT5G21130 27.632 7.84e-19 82.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g4039 - - gmx:100786652 418.313