Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g4026 ATGATGGATGGCCACCCCAGAAGCAAGTTCAAGAGGCTCTGTGTCTTCTGTGGAAGCAACTCTGGCAACCGAGATGTCTTCAGTGATGCTGCTATTCAATTGGGCAATGAACTGGTTAAGAGGAATATAGACTTGGTGTATGGTGGGGGAAGTGTTGGTCTTATGGGCTTAATATCCCAAAGAGTGTATGATGGAGGCTGCCATGTCCTAGGGATCATTCCAAAAGCTCTCATGCCTCTGGAGATATCTGGTGAAACAGTTGGTGAGGTGAGAATCGTTTCAGATATGCATGAGCGTAAAGCTGCAATGGCTCAAGAAGCTGATGCCTTTGTTGCTCTCCCTGGAGGATATGGAACCATGGAAGAGCTATTGGAGATGATAACTTGGGCGCAACTTGGAATTCATAAGAAACCGGTTGGTCTATTGAATGTTGATGGTTACTATAACTCTTTACTTGCATTGTTTGACAATGGTGTTCAAGAAGGATTCATTAAGCCTGGTGCACGGAATATAGTTGTATCTGCTCCTTCTGCCAAAGAACTTATGATGAAGATGGAGCATTACACTCCTTCGCATGAAAATGTTGCCCCTAGTGAGAGCTGGCAGATGAAGCAATTAGGTGATTATGCAGGACAAGAAAATGCAGAGTGA 651 0.4439 MMDGHPRSKFKRLCVFCGSNSGNRDVFSDAAIQLGNELVKRNIDLVYGGGSVGLMGLISQRVYDGGCHVLGIIPKALMPLEISGETVGEVRIVSDMHERKAAMAQEADAFVALPGGYGTMEELLEMITWAQLGIHKKPVGLLNVDGYYNSLLALFDNGVQEGFIKPGARNIVVSAPSAKELMMKMEHYTPSHENVAPSESWQMKQLGDYAGQENAE* 217
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g4026 216 PANTHER LOG FAMILY PROTEIN YJL055W 8 206 - -
Lja1g4026 216 MobiDBLite consensus disorder prediction 193 216 - -
Lja1g4026 216 PANTHER CYTOKININ RIBOSIDE 5'-MONOPHOSPHATE PHOSPHORIBOHYDROLASE 8 206 - -
Lja1g4026 216 TIGRFAM TIGR00730: TIGR00730 family protein 12 188 IPR005269 GO:0009691|GO:0016787
Lja1g4026 216 Gene3D - 9 204 - -
Lja1g4026 216 MobiDBLite consensus disorder prediction 193 207 - -
Lja1g4026 216 SUPERFAMILY MCP/YpsA-like 9 188 - -
Lja1g4026 216 Pfam Possible lysine decarboxylase 55 185 IPR031100 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g4026 Lja-Chr1 51024043 51026890 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g4026 K22522 - gmx:100785484 395.586