Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g4019 ATGGATCAATTCAAAGGACAACCGCGTCTTCCCAAATTCGCCGTTCCAAAACGCTACGACATCAAGCTCAACCCCGACCTCGCCGCATGCCGCTTCGCCGGCTCCGTCGCCGTCGACATCCAAATCGTCTCCGCCACCACCTTCATCGTTCTCAATGCCGCTGAGCTTTCCGTCTCCAACGACGCCGTATCGTTCACTATCCGAGACAATTCCAAGGTTGTCAAACCTTCAAGAGTTGAATTGTTTGAAGATGATGAAATTCTCGTGTTGGAGTTTCCAGAACAATTACCTGTAGGGTTTGGTGTCTTGGCAATTCTGTTTGAAGGAACACTCAATGATAGAATGAAAGGGTTCTACAGAAGTACCTATGAGCATAATGGTGAGAAGAAGAACATGGCAGTTACACAGTTTGAACCAGCTGATGCTAGGCGATGCTTTCCTTGTTGGGATGAACCTGCCTGCAAGGCTACTTTCAAGATCACATTGGATGTGCCTTCGGATCTTGTTGCTCTTTCCAACATGCCTGTTGCTGAGGAAAAGATAGATGGGAATCTGAAAACTGTTTCATATCAAGAATCACCAATCATGTCTACATATTTGGTTGCAGTTGTTGTTGGTTTGTTTGATTATGTGGAAGATCATACCACTGATGGGGTCAAAGTCCGAGTGTATTGTCAAGTTGGTAAGGCAAACCAGGGGAAATTTGCACTTCATGTTGCTGTGAAAACTTTGGAACTATTCAAGGATTACTTTGCCACTCCCTACTCCTTGCCAAAATTGGATATGATTGCGATCCCTGATTTTGCTGCTGGAGCCATGGAGAATTATGGTTTGGTTACATATCGTGAGACTGCTTTGCTCTATGATGATCAACATTCTGCTGCTTCGAACAAACAGAGGGTCGCTACTGTAGTAGCTCATGAACTAGCCCACCAGTGGTTTGGCAATCTTGTCACAATGGAGTGGTGGACACATTTATGGCTGAATGAGGGGTTTGCAACGTGGGTGAGCTATTTAGCAACTGATAGCTTGTTTCCTGAGTGGCAAATATGGTCTCAATTTCTTCAAGAATCTACTGAGGGTCTTAGATTGGATGGGCTTGCGGAATCCCACCCGATTGAGGTGGAGATAAATCATGCTCGTGAGATTGATGAAATATTTGATGCGATAAGTTATAGAAAAGGCGCATCTGTCATTAGGATGTTACAAAGCTATCTTGGCGCTGAAGTTTTTCAGAGATCACTCGCTTCATATATAAAAAGGCATGCTTGCTCAAATGCCAGGACTGAGGATCTATGGGCTGCACTTGAGGAAGGATCTGGTGAACCTGTGAATAAGTTGATGACCTCATGGACAAAGCAGCAAGGATATCCTGTTGTATCAGTTAAAGTCATTGATCAGAAATTGGAGTTTAATCAGTCACAATTTTTGTCAAGCGGTGCTCAAGGGGAAGGCGATTGGATTGTTCCAATCACACTATGCTTTGGCTCTTATGATGTCCGCAAGAATTTCCTCTTGCAAACGAAATCTGAAACACGTGATGTTAAAGAGTTGTTGGGTTCCCCAATTGCTGAAGGCGCTAAATCTTGGATTAAACTTAATGTGGAACAGGCTGGTTTCTACAGGGTGAAATATGATGAGCTGCTTGCGGCTAAACTTAGATATGCTGTAGAGAAACAATTCTTATCGGCCTCGGACCGATATGGAATTTTGGATGATACACAAGCACTAAGTATGGCTTGCCAAGAATCATTGACCTCCTTGATTAACTTGATGGGAGCTTACAGAGAGGAAGTTGATTATACTGTCCTGTCTAACCTGATTTCCGTAAGTTATAAAATTCAACGTATTGTAGCTGATGCAGTTCCCGACTTAGTAGATTATTTCAAGCAGTTCTTTATTAACCTTTTCCAATACTCTGCTGAGAGGCTTGGTTGGGAGCCTAAATCCGGAGAAAGTCATCTTGATGCAATGTTGAGAGGAGAAATTTTGACTGCCCTCGCCGGATTTGGACATGATCTGACCCTAGATGAAGCTAATAAGCGTTTTCAGGCATTCTTAGAAGACAGAAATACACCACTGCTTCCACCTGATTTAAGAAAGGCAACATATGTGGCGGTAATGCAACGGGCAAGCAAATCTAACCGATCGGGTTATGAATCCCTTCTGAAAATATACAGAGAAACTGACCTAAGTCAAGAAAAAACACGCATTCTAGGCTCACTGGGAGCTTCACATGATCCAGATCTAATTCTCGAAGTTCTTAACTTCGTGTTGTCTTCTGAGGTTCGTAGCCAGGATGCCGTTTTTGGGCTCGCTGTTGGTCGGGAGGGACGAGACGTGGCTTGGGCATGGCTTAAGGAAAAGTGGGAGTACATCGTAAAAACATATGGTTCTGGATTTTTGGTTACTCGCTTTGTCAGCTCAGTTGTCTCCCCGTTTGCATCCTTTGAGAAGGCCAAGGAAGTAGAGGAATTCTTTGCTAGCCATCCTATGCCTGCCATTGCTAGAACATTAAAGCAGAGCCTTGAGCGGGTATATATCAATGCAAACTGGGTGAAGAGTGTTCAGAATGAAAAAAGTATTGCCGATGCTATACAGGAGTTGGCATACAGGAAATACTAG 2625 0.4373 MDQFKGQPRLPKFAVPKRYDIKLNPDLAACRFAGSVAVDIQIVSATTFIVLNAAELSVSNDAVSFTIRDNSKVVKPSRVELFEDDEILVLEFPEQLPVGFGVLAILFEGTLNDRMKGFYRSTYEHNGEKKNMAVTQFEPADARRCFPCWDEPACKATFKITLDVPSDLVALSNMPVAEEKIDGNLKTVSYQESPIMSTYLVAVVVGLFDYVEDHTTDGVKVRVYCQVGKANQGKFALHVAVKTLELFKDYFATPYSLPKLDMIAIPDFAAGAMENYGLVTYRETALLYDDQHSAASNKQRVATVVAHELAHQWFGNLVTMEWWTHLWLNEGFATWVSYLATDSLFPEWQIWSQFLQESTEGLRLDGLAESHPIEVEINHAREIDEIFDAISYRKGASVIRMLQSYLGAEVFQRSLASYIKRHACSNARTEDLWAALEEGSGEPVNKLMTSWTKQQGYPVVSVKVIDQKLEFNQSQFLSSGAQGEGDWIVPITLCFGSYDVRKNFLLQTKSETRDVKELLGSPIAEGAKSWIKLNVEQAGFYRVKYDELLAAKLRYAVEKQFLSASDRYGILDDTQALSMACQESLTSLINLMGAYREEVDYTVLSNLISVSYKIQRIVADAVPDLVDYFKQFFINLFQYSAERLGWEPKSGESHLDAMLRGEILTALAGFGHDLTLDEANKRFQAFLEDRNTPLLPPDLRKATYVAVMQRASKSNRSGYESLLKIYRETDLSQEKTRILGSLGASHDPDLILEVLNFVLSSEVRSQDAVFGLAVGREGRDVAWAWLKEKWEYIVKTYGSGFLVTRFVSSVVSPFASFEKAKEVEEFFASHPMPAIARTLKQSLERVYINANWVKSVQNEKSIADAIQELAYRKY* 875
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g4019 874 Pfam Peptidase M1 N-terminal domain 15 200 IPR045357 -
Lja1g4019 874 Gene3D - 547 863 - -
Lja1g4019 874 Pfam ERAP1-like C-terminal domain 530 846 IPR024571 -
Lja1g4019 874 Pfam Peptidase family M1 domain 235 451 IPR014782 GO:0008237|GO:0008270
Lja1g4019 874 Gene3D - 457 545 - -
Lja1g4019 874 SUPERFAMILY Leukotriene A4 hydrolase N-terminal domain 9 206 IPR042097 -
Lja1g4019 874 CDD M1_APN-Q_like 18 453 IPR034016 -
Lja1g4019 874 PRINTS Membrane alanyl dipeptidase (M1) family signature 143 158 IPR001930 GO:0006508
Lja1g4019 874 PRINTS Membrane alanyl dipeptidase (M1) family signature 304 319 IPR001930 GO:0006508
Lja1g4019 874 PRINTS Membrane alanyl dipeptidase (M1) family signature 323 335 IPR001930 GO:0006508
Lja1g4019 874 PRINTS Membrane alanyl dipeptidase (M1) family signature 190 205 IPR001930 GO:0006508
Lja1g4019 874 PRINTS Membrane alanyl dipeptidase (M1) family signature 268 278 IPR001930 GO:0006508
Lja1g4019 874 SUPERFAMILY Metalloproteases ("zincins"), catalytic domain 215 462 - -
Lja1g4019 874 Gene3D tricorn interacting facor f3 domain 3 208 IPR042097 -
Lja1g4019 874 PANTHER AMINOPEPTIDASE 3 870 - -
Lja1g4019 874 PANTHER PROTEASE M1 ZINC METALLOPROTEASE 3 870 - -
Lja1g4019 874 Gene3D Neutral Protease Domain 2 209 456 IPR027268 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g4019 Lja-Chr1 50926846 50935111 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g4019 K08776 - gmx:100811437 1527.69
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja1g4019 1 50926846 50935111 Lja1g4019 1 50926846 50935111 ECH