Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g4017 ATGCCTATTGCAGTAAGCACTAATAAGGCAAAATCTCAGCATTATGAGTTACCAACTTCTTTCTTCAGGCTCGTGCTCGGGAAGAATCTCAAATACAGGGATCTTCAGCTGCAAAATTTGGATATCATTGTTGCAGATATTAGCACCTTTGAAATGGAAGCTTCTTATGACAGAATATATTCCATAGGAATGTTTGAGGACGAAAATGAAGATGACTGGATTACAAGATACTTCTTCATAGGAGGAACCATGCCTTCAGCAAATCTACTTCTTTATTTCCAAGATGATGTTACTGTCATCAACCATTGGCTGCTAAATGGGAAACACTATGCACAGACCAGTGAAGAATGGCTCAAGATAATGGACAAGAACATGAGTTCTATTAAGCCAATAATGGAATCAACATACGGCAAGGATTCAGCTATCCAGTGGACTGTCTATTGGAGAACATACTTCATAGCTATTGCAGAACTTTTTGGATACAATAATGGGGAAGAATGGATGGTCGCACATTTTCTTTTCAAAAAGAAATAA 534 0.3783 MPIAVSTNKAKSQHYELPTSFFRLVLGKNLKYRDLQLQNLDIIVADISTFEMEASYDRIYSIGMFEDENEDDWITRYFFIGGTMPSANLLLYFQDDVTVINHWLLNGKHYAQTSEEWLKIMDKNMSSIKPIMESTYGKDSAIQWTVYWRTYFIAIAELFGYNNGEEWMVAHFLFKKK* 178
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g4017 177 Coils Coil 174 177 - -
Lja1g4017 177 PANTHER - 33 66 - -
Lja1g4017 177 PANTHER S-ADENOSYL-L-METHIONINE-DEPENDENT METHYLTRANSFERASES SUPERFAMILY PROTEIN 65 177 - -
Lja1g4017 177 Gene3D Vaccinia Virus protein VP39 65 171 IPR029063 -
Lja1g4017 177 PANTHER S-ADENOSYL-L-METHIONINE-DEPENDENT METHYLTRANSFERASES SUPERFAMILY PROTEIN 1 33 - -
Lja1g4017 177 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 13 173 IPR029063 -
Lja1g4017 177 PANTHER - 1 33 - -
Lja1g4017 177 PANTHER - 65 177 - -
Lja1g4017 177 PANTHER S-ADENOSYL-L-METHIONINE-DEPENDENT METHYLTRANSFERASES SUPERFAMILY PROTEIN 33 66 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g4017 Lja-Chr1 50921564 50923858 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g4017 - - lja:Lj3g3v0420540.1 293.508
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja1g4017 1 50921564 50923858 Lja1g4017 1 50921564 50923858 ECH