Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g4002 ATGGCTGTATCTTCCACCACCACCACCACAATATGCATTTCAGGTAACAACATTGTTCCAGTCTATCAATCACCAAAACTTGGATTCTTATCTACCAACTGTTTTCATGTGAAACCACGGAGATTGTGCATTAGAAGCTCGAGTGATGTCTCTGCTGAGACCACTGACACTGAGGTGGAATCAATTGAAGTCCCAAAAGAACCTCCATCTTTGATTTCTGCTCTCAACGTGGAAAGGGCTCTCCGTGGCTTACCAATTACAGATGCAGATCATTATGGTAGACTCGGCATTCCAAGAGGATATCCCTCTAACAAGGTGGCGGTTGCATACAACAACAAGGTGCGAGAATTGGAGAGTCAAGGTTTAGAGGAAGAGGAACTCAAGAAGCAATTGGAACTTCTCAGAGAATCATACACCATCATGTCATCAGTAGAAGAAAGAAGATTATATGATTGGAGCTTGGCCAGAACAGAGAATACAGGGAGATACAATTGGCCATATGAGGCTGACATAACACCACTTACAACGGAAGAGTCTCCACCAGAGGATCCTGAAGATGTCGGACCAACTAGAGTGGTTGGATTCGTCTTTCTGGGATGGATAGTGATCTCAGTTGTGTTATCTATTTCACTAAACTTATAG 642 0.433 MAVSSTTTTTICISGNNIVPVYQSPKLGFLSTNCFHVKPRRLCIRSSSDVSAETTDTEVESIEVPKEPPSLISALNVERALRGLPITDADHYGRLGIPRGYPSNKVAVAYNNKVRELESQGLEEEELKKQLELLRESYTIMSSVEERRLYDWSLARTENTGRYNWPYEADITPLTTEESPPEDPEDVGPTRVVGFVFLGWIVISVVLSISLNL* 214
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g4002 213 PANTHER NAD(P)H-QUINONE OXIDOREDUCTASE SUBUNIT U, CHLOROPLASTIC 1 213 IPR044199 GO:0009535|GO:0010598
Lja1g4002 213 SUPERFAMILY Chaperone J-domain 89 156 IPR036869 -
Lja1g4002 213 Coils Coil 114 137 - -
Lja1g4002 213 Gene3D DnaJ domain 86 164 IPR036869 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g4002 K23052 - gmx:100793741 236.498
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja1g4002 1 50746908 50748760 Lja1g4002 1 50746908 50748760 ECH