Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g3996 ATGGCCACTGAAACAGATCCTAAGAAGGTATCTTCACATTGTTGGCGAAATACTCAAACACCATTCGCACTCCCCATTCTCAAACCCCCAATCTCCAACCTCACCTCTTTCCTTTCTCCCCCTGAACTCCACAAATCCTTCACCACCGCCACAGATAACTGTTTCAGATTTCTTCACTCCCTCGCTTCTCAAAACCCATTCCTCAACAAAATCCTCTCCCTTCGCTCCGAATTCGACAGCTTGTGCTTCCAGATTCGATGCAGTAACTATAGGAGCAGGAGGTGGTTGAGTAGTCACAATTTCGCGGCTGTTTTGCCTGGGGATTCGGTGGCTGGGCTTGTGGTGGGTAATGGAATCCAGAATTTCTTGAACATTTACAACACATTGCTCGTTGTTAGGCTTGTTTTGACCTGGTTTCCCAATTCTCCACCTGCCATCGTTGGCCCCCTCAGCACCATATGTGACCCATATCTGAACTTATTCCGTGGATTAATCCCCCCTCTTGGAGGAACACTGGATCTCTCTCCCATCCTAGCATTCCTGGTCCTAAACGCCTTCACTAGCGCTTCTGCCGCACTTCCTGCTGAGCTTCCAGTCACACAACAATCTGAACAAGGTGTTGCAGCAACACTGCAGTCTACTGATATTACTTCTTCACAGAAGAAATGGATGAAACGGCTTCAAGGGAACAGGGAAAACAAAGAGCTCTGA 711 0.4796 MATETDPKKVSSHCWRNTQTPFALPILKPPISNLTSFLSPPELHKSFTTATDNCFRFLHSLASQNPFLNKILSLRSEFDSLCFQIRCSNYRSRRWLSSHNFAAVLPGDSVAGLVVGNGIQNFLNIYNTLLVVRLVLTWFPNSPPAIVGPLSTICDPYLNLFRGLIPPLGGTLDLSPILAFLVLNAFTSASAALPAELPVTQQSEQGVAATLQSTDITSSQKKWMKRLQGNRENKEL* 237
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g3996 236 PANTHER YLMG HOMOLOG PROTEIN 2, CHLOROPLASTIC 42 232 - -
Lja1g3996 236 Pfam YGGT family 122 185 IPR003425 GO:0016020
Lja1g3996 236 PANTHER YLMG HOMOLOG PROTEIN 2, CHLOROPLASTIC 42 232 IPR003425 GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g3996 Lja-Chr1 50728206 50730328 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g3996 K02221 - gmx:100802756 327.791
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja1g3996 1 50728206 50730328 Lja1g3996 1 50728206 50730328 ECH