Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g3992 ATGCTTCCCTCGTTCGTCAGCTTCGCCGCCCTCTACAGCAGCTACCTCCGCCGCTGCTTCACCGGAGCCGGCCTCACCTCCCAATCCATCCCCATCGACGACGAAACCACCGTCCACTATTGGTCGCCCAAAATCGAAAACCCCCAAAAGCCCTCCCTCCTCCTGATCCACGGATTCGGCCCCATGGCGATCTGGCAATGGCGCCAACAGGTCCAATTCCTCGCTCCTCACTTCAATATCTACGTCCCTGACCTCGTCTTCTTCGGCGGATCCACCACCACCTCCGCCGAGAGGAGCGAGCGGTTTCAGGCCGCCACGGTGGGGAAGCTGGTTGAAAAGCTAGGGTTGAAGAGGTTTCATGTGGTGGGGACTAGCTATGGTGGATTCGTGGCGTACCATTTGGCGGAGATGTTGGGGGAGAGGGTGGAGAAGGTGGTGATTGCGAGTTCTGGGGTGAACATGAAGAAGAGTGATAACGCGGCGTTGTTGCAGAGGGCGGAGTTGGAGAAGATTGAGGATCTCATGTTGCCGGTGACGCCGCAACAGTTAAGGAAATTGATGACCCTGGCGGTTTCTAAGCGTGTTCAGTTTGTGCCTGATTTTTTCTTGAAGGACTACTTGAATAAATTATACAAGGAGAATAGGAAGGAAAAGATGGAGCTTCTAAAAGCCATATCACTTGGAAGGGAAGATACTTCAAACCTTTCATCTCTTCAACAGGAGGTTCTCATAGTCTGGGGGGAAAATGATCGGATATTTCCCGTGCAGATGGCCCATGAATTGAAAGAGGCAATCAGCCAGAAGGCAAGACTGGAATTGATTAAGGACGCATCCCATGTGCCTCAACTTGAAAAGCCAGTAGAATTCAACAATATAATCCTCAATTTCTTAAATGCGTCTTCTTAA 906 0.5121 MLPSFVSFAALYSSYLRRCFTGAGLTSQSIPIDDETTVHYWSPKIENPQKPSLLLIHGFGPMAIWQWRQQVQFLAPHFNIYVPDLVFFGGSTTTSAERSERFQAATVGKLVEKLGLKRFHVVGTSYGGFVAYHLAEMLGERVEKVVIASSGVNMKKSDNAALLQRAELEKIEDLMLPVTPQQLRKLMTLAVSKRVQFVPDFFLKDYLNKLYKENRKEKMELLKAISLGREDTSNLSSLQQEVLIVWGENDRIFPVQMAHELKEAISQKARLELIKDASHVPQLEKPVEFNNIILNFLNASS* 302
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g3992 301 Pfam Alpha/beta hydrolase family 53 290 IPR000073 -
Lja1g3992 301 Gene3D alpha/beta hydrolase 12 300 IPR029058 -
Lja1g3992 301 PANTHER ALPHA/BETA-HYDROLASES SUPERFAMILY PROTEIN 5 297 - -
Lja1g3992 301 PRINTS Alpha/beta hydrolase fold signature 77 92 IPR000073 -
Lja1g3992 301 PRINTS Alpha/beta hydrolase fold signature 121 134 IPR000073 -
Lja1g3992 301 PRINTS Alpha/beta hydrolase fold signature 135 148 IPR000073 -
Lja1g3992 301 PRINTS Alpha/beta hydrolase fold signature 242 256 IPR000073 -
Lja1g3992 301 SUPERFAMILY alpha/beta-Hydrolases 24 298 IPR029058 -
Lja1g3992 301 PANTHER SI:DKEY-122A22.2 5 297 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g3992 Lja-Chr1 50670821 50672897 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja1g3992 51 297 Acyl Lipid Metabolism Gene Families AT4G02340 24.399 2.37e-08 52.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g3992 - - lja:Lj1g3v1788330.1 594.734
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja1g3992 1 50670821 50672897 Lja1g3992 1 50670821 50672897 ECH