Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g3970 ATGAGGACACTGGTTTCGCGCTTGATCCATTCCACTCCCTCCATTTCCAGGCTCAATGCAACGGCTGTGAGAAATCTCTGCACGGAACCTAACAAGGTTGACGAGCCCTTCAAAGTTGAAGAAGCAGAGACTGTAAATGTGCCTCCACCTCCAACAGAGAAGTTGCTTGTGTTGGGAGGCAATGGATTTGTTGGATCACATGTTTGTAGAGAAGCATTAAATCATGGGTTGTCTGTTGCCAGTCTTAGCAGGTCTGGTAAGTCATCCCTGCATGATTCCTGGGCTACTGATGTCATCTGGTATAAAGGGAATCTCCTTTCAACTGATTCATTGAAAGAAGCTCTGAATGGGGTCACTGCTGTTATCTCATGTGTCGGTGGTTTTGGCTCCAACTCATACATGTACAAAATTAATGGGACTGCTAACATCAATGCAATTAGAGCAGCTTCTGATCAAGGTGTTAAAAGATTTGTCTATATTTCTGCTGCTGACTTTGGTGTAGTAAATTACTTACTACAGGGGTATTATGAAGGAAAGAGAGCTGCTGAAACAGAGCTTTTGACCAGATTTCCTTATGGAGGAGTAATTCTGAGGCCAGGATTTATTCATGGGACTCGAACTGCTGGGAGTATGAAGATACCCCTTGGTGTGATTGGATCTCCATTAGAGATGGTTCTGCAACATGCTAAACCATTGACCCAGATCCCACTTATAGGGCCTCTATTGACACCTCCTGTGAATGTTATCGCGGTGGCAAAAGTTGCTGTTAGAGCTGCTACTGAGCCTGTTTTCCCTCCGGGGATCTTAGATGTCTATGGAATACAACGTTACAGTCAGCAGCATAAATAA 849 0.4429 MRTLVSRLIHSTPSISRLNATAVRNLCTEPNKVDEPFKVEEAETVNVPPPPTEKLLVLGGNGFVGSHVCREALNHGLSVASLSRSGKSSLHDSWATDVIWYKGNLLSTDSLKEALNGVTAVISCVGGFGSNSYMYKINGTANINAIRAASDQGVKRFVYISAADFGVVNYLLQGYYEGKRAAETELLTRFPYGGVILRPGFIHGTRTAGSMKIPLGVIGSPLEMVLQHAKPLTQIPLIGPLLTPPVNVIAVAKVAVRAATEPVFPPGILDVYGIQRYSQQHK* 283
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g3970 282 Gene3D - 48 272 - -
Lja1g3970 282 PANTHER NADH-UBIQUINONE OXIDOREDUCTASE 39 KDA SUBUNIT-RELATED 19 281 - -
Lja1g3970 282 Pfam NAD(P)H-binding 59 204 IPR016040 -
Lja1g3970 282 PANTHER BNAANNG24990D PROTEIN 19 281 - -
Lja1g3970 282 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 54 273 IPR036291 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g3970 Lja-Chr1 50372266 50378164 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g3970 - - gmx:100791278 490.345
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja1g3970 1 50372266 50378164 Lja1g3970 1 50372266 50378164 ECH