Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g3963 ATGAGATCTATTGAAACCCAGTTGGGTGCTTCTATTGATGAAATTTTTAGTGACATTAGCCCAGAACCTATTGCAGCAGCATCCTTAGGACAAGTTTATAAAGCTCACCTGCGATCTGGAGAGCTCGTAGCTGTAAAAGTACAGAGGCCTGGCATGTCACTTTCATTGACCCTTGATGCGTTGTTATTTCACATGATCGGGGACCAACTAAAACGGTTTGCTAAAGCTCGCAAAGATCTTTTGGTAGCAGTAAATGAAATGGTCAGGCACATGTTTGATGAAATTGATTATGTCCTCGAGGGAAAAAATGCAGAGCGCTTTACGTCTCTCTACTGTTCGCCTGCAAGTAGTGATGATATTAAACACAGACGAGTGAAGTCCATCAAGGCTCCAAAAATATATTGGGACTATACATGTCCAACTGTTCTGACCATGGAGTGGTTAGATGGAATTAAGCTTACAGATGAAACAGGGTTGAGAAAAGCTTCTTTGAGCAGAAGGGAACTCATTGACCAGGGATTAAACTGCTCTTTAAGGCAACTGCTTGAGGTTGGTTATTTCCATGCTGATCCTCATCCCGGAAACCTCGTTGCAACAAATGATGGATCACTAGCGTATTTTGACTTTGGAATGATGGGGGATATTCCTAGACATTATCGTATTGGACTTATTCAAATTATCGTACACTTTGTTAATCGCGACTCTCTGAGCTTGGGAAATGACTTCCTTTCCTTGGGATTTCTTCCTGAAGGGGTTGATATACATCCAGTTGCTGATGCGCTGCGAGCATCATTTGCCGACCGGAACAGTGAATCTCAAGATTTCCAGGGAATTATGAACCAACTATATGATGTCATGTATGAATTTAACTTCTCCCTCCCACCAGACTATGCTCTTGTTATAAGGTCATTGGGATCACTTGAAGGGACAGCGAAAGTTCTGGATCCTGATTTTAAAGTCATCCAGAGTGCATATCCTTTTGTCATTGGGAGACTTATAGCAGATCCAAGTCCTGATATGAGAAAAATATTGAGGGAACTTCTAATTCGTAATGATGGATCCATAAGGTGGGGCCGACTAGAGCGCCTGATAGCAGCAATATCTGAACAGGCTTCTGAGCAAACTGGAGACCCTAGTTCTGCAAAGGACTCGAGTCCTTCTGTTTGGAAATTATTTGACATGCATGCAGTTGTTGATTCCACAGAAGATCTTCTATCATTCATATTATCTGAGAAGGGTCGCAGAGTGCGTCTTTTCCTTCTACGGGATATAGTAGAAGCAGCTGATATATTTTTGCAAGATGAAGTGATTGATCCCACGTTAAATGAGAAACCACAAGGCCATAGGATACTGCTCTTTGAGGAACGTGCTATGCTTTCTAGGATTGGAAAAGGTTTTCAATACCTTCGTGACGTGGTGAAGTTGGCGCCAGAGGAGTGGACAGGGATGCTTATTCGGATGGCAGTGAAGCCGGAGGTTCACAAATTTACTTTTGACATTATTTCAGCTTTAGCTTTGCATTCTAGCCACAAATTGCAGGTAGCTTCTTGGCTCTATTTGTCAAGACTTCTTCACAAACTGTCAAATTGA 1590 0.422 MRSIETQLGASIDEIFSDISPEPIAAASLGQVYKAHLRSGELVAVKVQRPGMSLSLTLDALLFHMIGDQLKRFAKARKDLLVAVNEMVRHMFDEIDYVLEGKNAERFTSLYCSPASSDDIKHRRVKSIKAPKIYWDYTCPTVLTMEWLDGIKLTDETGLRKASLSRRELIDQGLNCSLRQLLEVGYFHADPHPGNLVATNDGSLAYFDFGMMGDIPRHYRIGLIQIIVHFVNRDSLSLGNDFLSLGFLPEGVDIHPVADALRASFADRNSESQDFQGIMNQLYDVMYEFNFSLPPDYALVIRSLGSLEGTAKVLDPDFKVIQSAYPFVIGRLIADPSPDMRKILRELLIRNDGSIRWGRLERLIAAISEQASEQTGDPSSAKDSSPSVWKLFDMHAVVDSTEDLLSFILSEKGRRVRLFLLRDIVEAADIFLQDEVIDPTLNEKPQGHRILLFEERAMLSRIGKGFQYLRDVVKLAPEEWTGMLIRMAVKPEVHKFTFDIISALALHSSHKLQVASWLYLSRLLHKLSN* 530
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g3963 529 PANTHER CHAPERONE-ACTIVITY OF BC1 COMPLEX CABC1 -RELATED 1 517 - -
Lja1g3963 529 PANTHER PROTEIN KINASE SUPERFAMILY PROTEIN 1 517 - -
Lja1g3963 529 Pfam ABC1 atypical kinase-like domain 3 236 IPR004147 -
Lja1g3963 529 SUPERFAMILY Protein kinase-like (PK-like) 4 222 IPR011009 -
Lja1g3963 529 CDD ABC1_ADCK3-like 1 242 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g3963 Lja-Chr1 50288906 50293849 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g3963 K08869 - gmx:100811652 900.968
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja1g3963 1 50288906 50293849 Lja1g3963 1 50288906 50293849 ECH