Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g3960 ATGTGTTCCACCACCGCCAATTCCCGATCCTCCGGATCCACCACCGCCCACTGGCTCTCCGACGCAATCCACGGCGGCCCCCTCCGCCTCGTCGAATTAGAAACCGGCACCAACGGCTGGGCCTCCCCTCCCGGCGACGTCTTCCACCTCCGCTCCGGCAACTACCTAACAAAGAAGCACAAATCCCCCGCCGGCGACTACCTCCTTTCCCCTGCCGGCATGGACTGGCTCAAATCCCCGTCCAAGCTCGACAACGTCCTCGGCCGCGCCGACAACCGCGTCACCCAGGCGCTGCGTCGGGCACAGTCGAGAGGTGAATCAATGAAGAGCTTCGTCTTCGCGGTGAACCTCCAGGTCCCTGGAAAAGAGCATCACAGCGCGGTGTTCTACTTCGCGACGGAGGAACCGGTCCATCCCGGTTCTCTTTTGGGACGGTTCATCGACGGCGACGACGCGTTTCGGAACCAGCGGTTCAAGCTGGTGAACCGGATCGTGAAGGGGCCGTGGATCGTGAAGAAAGCGGTGGGGAACTACGGCGCGTGCTTGCTCGGGAAGGCGCTGACGTGTCACTACCACCGTGGGCCGAACTACTTCGAGATTGATGTCGACATTGGGAGCAGCGCCATCGCGAATGCTATCCTGCGCCTGGCGTTGGGGTATGTCACCACCGTGACTATTGATATGGGGTTTGTTGTGGAGGCGCAGACGGAGGAGGAGCTGCCGGAGAAGTTGATCGGAGCTGTTAGGGTTTGCCAGATGGAGATGAACTCCGCCACTATCGTCGATGCTCCCAAGATTGGGTTCGCCAAGGTCAATCATGTTAGTGCCAGCGATGAAAATTAA 843 0.6002 MCSTTANSRSSGSTTAHWLSDAIHGGPLRLVELETGTNGWASPPGDVFHLRSGNYLTKKHKSPAGDYLLSPAGMDWLKSPSKLDNVLGRADNRVTQALRRAQSRGESMKSFVFAVNLQVPGKEHHSAVFYFATEEPVHPGSLLGRFIDGDDAFRNQRFKLVNRIVKGPWIVKKAVGNYGACLLGKALTCHYHRGPNYFEIDVDIGSSAIANAILRLALGYVTTVTIDMGFVVEAQTEEELPEKLIGAVRVCQMEMNSATIVDAPKIGFAKVNHVSASDEN* 281
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g3960 280 PANTHER PROTEIN ENHANCED DISEASE RESISTANCE 2-LIKE 1 264 - -
Lja1g3960 280 Pfam Protein ENHANCED DISEASE RESISTANCE 2, C-terminal 40 254 IPR009769 -
Lja1g3960 280 PANTHER ENHANCED DISEASE RESISTANCE-RELATED 1 264 IPR045096 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g3960 Lja-Chr1 50255994 50258184 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g3960 - - gmx:100800245 452.595
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja1g3960 1 50255994 50258184 Lja1g3960 1 50255994 50258184 ECH