Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g3956 ATGGCTAGTTGTGTACCTTGTAGTTCAGGTTCTGGATCTGTGCTCATTTCCAAAGCAATAGTGAGCAAAAGTGTCTTCCTATCACCAATTCGTATTGCGCTGAATGTGGACGGAACCGCAAGTTCCAGTTTCAGCAGAAACTCTCGCTTACGCATCCGGGTTTCAATGGTTGATTCCTCCTCCAATTTCGCCAAGCGAATCGAACGAGCCTGGTTAATCTCTCAGCAACCAACGCCGATCGTGTGTTCATCTTGCAACTCAAAAGGGCATATTGAATGCAAATGGTGCGCGGGTACTGGTTTTTTTATTATTGGAGACAACATGCTTTGCGAAGTCCCATCCAGAAACACTAGCTGTATTATTTGCACTGGAAAGGGATCAACTTGCTGCTCGAATTGTCAAGGAACAGGCTTTCGTGCAAAGTGGTTGGAAGAACCTCCTACATCCGAGTAG 453 0.4592 MASCVPCSSGSGSVLISKAIVSKSVFLSPIRIALNVDGTASSSFSRNSRLRIRVSMVDSSSNFAKRIERAWLISQQPTPIVCSSCNSKGHIECKWCAGTGFFIIGDNMLCEVPSRNTSCIICTGKGSTCCSNCQGTGFRAKWLEEPPTSE* 151
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g3956 150 PANTHER PLASTID TRANSCRIPTIONALLY ACTIVE PROTEIN 40 149 - -
Lja1g3956 150 PANTHER OS09G0423700 PROTEIN 40 149 - -
Lja1g3956 150 SUPERFAMILY DnaJ/Hsp40 cysteine-rich domain 80 139 IPR036410 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g3956 - - lja:Lj0g3v0271799.1 303.908
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja1g3956 1 50222483 50224695 Lja1g3956 1 50222483 50224695 ECH