Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g3955 ATGGAGATGACCGCACAGCAACTGAGCCAATACAACGGCACGGACCCATCGAAGCCAATCTACGTCTCGGTGAAGGGCCGCGTGTTCGATGTCACCACCGGAAAATCCTTCTACGGCCCCGGTGGTGCTTACGCGATGTTCGCCGGAAGAGACGCCAGCAGAGCCCTAGCGAAGATGAGCAAGAACGAGGAAGATATCTCCCCCAACCTCGATGGCCTCTCCGACAAAGAGATCGGCGTTCTCAATGACTGGGAGAACAAGTTCGTAGCTAAGTACCCTGTTGTTGCTCGCCTTGTTTCTTAA 303 0.5479 MEMTAQQLSQYNGTDPSKPIYVSVKGRVFDVTTGKSFYGPGGAYAMFAGRDASRALAKMSKNEEDISPNLDGLSDKEIGVLNDWENKFVAKYPVVARLVS* 101
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g3955 100 SUPERFAMILY Cytochrome b5-like heme/steroid binding domain 2 99 IPR036400 -
Lja1g3955 100 Pfam Cytochrome b5-like Heme/Steroid binding domain 4 94 IPR001199 -
Lja1g3955 100 SMART Cyt_b5_2 3 99 IPR001199 -
Lja1g3955 100 Gene3D - 1 100 IPR036400 -
Lja1g3955 100 PANTHER MEMBRANE-ASSOCIATED PROGESTERONE RECEPTOR COMPONENT-RELATED 2 99 - -
Lja1g3955 100 PANTHER CALCUTTA CUP-RELATED 2 99 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g3955 Lja-Chr1 50204166 50204965 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g3955 K17278 - gmx:100779765 187.193
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja1g3955 1 50204166 50204965 Lja1g3955 1 50204166 50204965 ECH