Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g3954 ATGCAGGAAGATGAGGAAAATCTGAAGGATTCCTCTGATGGAGTTGTGGAGCAAAAATATGAAACCAGAAAGGGGGGTTGTGGAGGGTGTCTCTGCATTCCCCTGCACTGGTTCAGAATGCTTTCAAGGGAAACGCATTGGAGCTTTGTGCTTGGGGTGATACTTGTTTATGGTGTGAGTCAGGGACTTGGTGGAGCTTTTTCTGGCGTTGCCACCAAATATTACATGAAAGATGTTCAAAAAGTGCAGCCATCAGAAGCACAAGTTTATGGAGGAATCACATACATTCCTTGGATTGTTAAGCCTCTCTGGGGGCTTCTCACTGATGTTCTCCCAATTTTTGGATATCGCCGGCGTCCTTATTTCGTTTTTGCTGGTTTCTTGGGAGTGTTTGGCATGCTTATGTTATCTTTGCACGAGAATCTGCATCTTGCGTTGGCCCTTCTATCATTAACGGCTGGGAGTGCCGGTGTCGCTATAGCTGACGTTACCATTGATGCCTGCGTGGCACAGAATAGTATCTCTCATCCTTCACTAGCTGCTGACATGCAAAGTTTATGTGCCTTCAGTAGTTCAGTTGGAGCATTATTAGGATTCTTCTTTAGTGGTATCTTTGTCCACCTTATAGGACCTATGGGGGTGTTTGGTTTGATGACAATCCCAGCCGGACTTGTAATTTTGGTTGGTTTTCTGCTTGATGAGCCCCATATACCTAACTTTGCTTACAAACAGGTGAACCAAAAGTTTCTGGATGCGACCAAGGCTATGTGGACGACATTGAAGAGCGAAGATGTTTGGAGGCCTTGTTTATACATGTATTTATCCCTTGCATTGAGTTTGAATATTCTTGAAGGAATGTTCTATTGGTATACAGACTCAAAAGCTGGACCATCTTTCTCTCAGGAGACTGTTGGTTTTATATTTTCGATTGGTTCGGTTGGCTCGCTTTTTGGCGCAATACTATACCAGTATGCTTTAAAGGATTATGCATTCAGAGACTTGCTCTTCTGGACTCAATTACTATACAGTTTGTCAGGCATGCTAGATTTGATTATGGTTGTGCGATTGAACCTTAAGTTCGGCGTACCAGATTATGTCTTTGTTGTGGTCGTTGAAAGTGTAGCTCAAATGACTATTAGGCTCAAGTGGATGCCATTGCTTGTGCTCAGTTCAAAGCTTTGTCCCTCAGGTATTGAAGGCACTTTCTTTGCACTACTAATGTCAATTGATAATATTGGACTTCTCTCAGCATCATGGGGAGGAGGCTTTTTGCTCCATATACTAAAGATTTCACGAACGCAGTTTGATAATCTTTGGTTCGCTATTTTGATACGGAATATTCTGAGAATCACTCCACTTTGCCTGCTGTTTTTGGTGCCTAGAGCTGATCCAAACTCTTCTATTCTTACAAGCGAATGCTTGAGTTCACAAGTGTGTATTGAGACTTCAGAAACTCAGAATATTGAATTGGTTTCCCTTGTAAACAATGTTGATGGAAGCTAG 1503 0.4245 MQEDEENLKDSSDGVVEQKYETRKGGCGGCLCIPLHWFRMLSRETHWSFVLGVILVYGVSQGLGGAFSGVATKYYMKDVQKVQPSEAQVYGGITYIPWIVKPLWGLLTDVLPIFGYRRRPYFVFAGFLGVFGMLMLSLHENLHLALALLSLTAGSAGVAIADVTIDACVAQNSISHPSLAADMQSLCAFSSSVGALLGFFFSGIFVHLIGPMGVFGLMTIPAGLVILVGFLLDEPHIPNFAYKQVNQKFLDATKAMWTTLKSEDVWRPCLYMYLSLALSLNILEGMFYWYTDSKAGPSFSQETVGFIFSIGSVGSLFGAILYQYALKDYAFRDLLFWTQLLYSLSGMLDLIMVVRLNLKFGVPDYVFVVVVESVAQMTIRLKWMPLLVLSSKLCPSGIEGTFFALLMSIDNIGLLSASWGGGFLLHILKISRTQFDNLWFAILIRNILRITPLCLLFLVPRADPNSSILTSECLSSQVCIETSETQNIELVSLVNNVDGS* 501
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g3954 500 CDD MFS_FBT 52 457 - -
Lja1g3954 500 PANTHER FOLATE-BIOPTERIN TRANSPORTER 1, CHLOROPLASTIC 17 498 IPR039309 -
Lja1g3954 500 PANTHER FOLATE-BIOPTERIN TRANSPORTER 2-RELATED 17 498 - -
Lja1g3954 500 Gene3D MFS general substrate transporter like domains 38 445 IPR036259 -
Lja1g3954 500 SUPERFAMILY MFS general substrate transporter 47 459 IPR036259 -
Lja1g3954 500 Pfam BT1 family 276 463 IPR039309 -
Lja1g3954 500 Pfam BT1 family 61 228 IPR039309 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g3954 Lja-Chr1 50197579 50200967 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g3954 - - lja:Lj0g3v0092339.3 863.603
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja1g3954 1 50197579 50200967 Lja1g3954 1 50197579 50200967 ECH