LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Lja1g3952	ATGAGTAACCAAAATGGTTCAAGCAATGACCGGTCAAGGATGCATTGGACTCCATTGATGGAGCGTTACTTCATTGATCTAATGTTGGAGCATTTGCAGAGAGGAAACATGGTTGGCCACACTTTCAACAAGGATGCTTGGACAGACATGCTCACCATGTTCAATGCCAAGTTTGGTTCACAGTGTGATAAGGACGTCTTGAAAGCTCGTTATACTAATCTGTGGAAGCAGTTCAATGATGTCAAGAACATTCTATCTCACTTTGGTTTTTCTTGGGATGCTGTGCATCAAAGGGTTGTGGCTGATGATTTTGTTTGGGAGGATTATATCAAGGCTCACCCTGATGCACGGTGCTTTAGGACTAAACCAGTGCTTAACTTTGATGATTTGTGCATGATATATGCTCACACCTTTGCTGGTGGAAGATATAGTTTATCAAGCCATGATGTAAGCCTTGATGATCAAATGCCAGGACTGCATTTGCCCTCAGGTGATGGAACAGGAAGCTCTGCTGTATCAAGTAATGAGCTGCTCAAGACAGATTGGACTGCTTCAATGGACCAATTTTTCGTTGAGCTTTTGCTTGATCAGTTGGGCAGGGGCAATCAAGTCAATAATTCATTCAATAAAAAGGCTTGGACAGATATGCTAGCCATGTTCAATGCTAAATTTGGATCTCAACATGGTAAAAGGATTTTAAAGAATCGATTCAAGAAACTGCTGAAATGTTACCGTGACATGACAAAACTTCTAAAACAAGGCTTTTTGTGGAATGAACAACAGCAGATGCTTGTCGCTGATGATGATGTCTGGGATGCTTATATCAAGGCACATCCACATGCACGTACATATAGATTGAAAACATTGCCAAACTATCATGATTTAGAATTATTATTCAGAAATGTGTGTGGAGATGAGATCAGTAATTTGCATCAGGAGAAAAATCATGAAGCTGTCATATCCGAAACAAAGAGGGGTGAACAAAAACGAAGGCGGAACCCAAGTGGTACTGATCGTACTAGAACATGTTGGACACCCCCGATGGATGCTTGCCTCATTGACTTGTTATTAGAGCAGGTCAAAAGGGGAAATAGACTTGGGCAAACATTCATTACCCGGGCTTGGAATGGCATGACTGTGTCTTTCAATGAACAATTCAAATCTCAATATGACAAAGATGTTCTGAAGAATCGTTACAAACATTTGAAGAAACAGTTCAATGAGGTGGACAATCTTCTTCAGCAGGATGGGTTCTCATGGGATGATACAAAAGAAATGGTTAATGCAGAGGATCATGTTTGGGATGCTTATACAAAGGCACACCCTGAAACTCGATCACTTAGAGTTAAAACCTTACCAGGATATCACAAATTGTGTGTTATATTTGGAGAGGAATGTTCTGATTCTAGACATTTCAGTTTATCACATGATGCAGATCCCAGTAACGAATTATTAGTGTTGATAACAGGTGAACAGAAGAATGCCACAGGTCCCAATGTTTATGATGCTGATTCTACAATAGAATGGATGGAATCAATGGAAATCTGTTTTGTTGACCTTATGATTGAGCAACTAAACAGAGGAAAGAGGATTGGAGAGTTTTTCAATGAGTATGCATGGACCCAGGTGACTGAAGCATTCAACGCTAGATTGGGACTCCAATGTGATAAGCAATTTCTCGTAGATCAGTATTTCTGCTTGATGAAAAAGCATAATGACATCAGCAAAATTCTCAGTCACAGTGGATTTACATGGGATGAAACTCTACAAACGGTAACTGCTGAGAATGATACCTGGGATGCATATATTAAGGATCACCCAGATGCCGTATCATATAAAAACAGGTTTTTGTATCTTTTCAATGATTTGTGCAAGATTTTCGGAAACAAAGTGATGCAAGTACCAGATGCAGGAGAGATTGCTCAGGATCAGCACCAGTTGATCGAAGCCAACGATGTCACCGTTGAGATCGATATGGACGGAACATGTGAAGATCTGGCTGAGATTAGCAATTTTGATATATCCGATGAGGACTTAGACTGGCCAAGGGAATTGAACATGGATGGATCACCTGAAAATTTGGTTGAGAGTGGCAGCCCTAAAATTTCATTCCAAGATAAGAAAAAGCCAAGTGTGAACAATATGTTTGGAATGTCTGGAATTTTGGATGGGACTATTAAAAATGAAATATCAAACCTAGATACAGAAAGACCTAAGGAAATGGGAATGGATATAACAACATCTGGTGATTTTGCTGTGATTGGGAACACTCAAATAACATCTCAAGATAAGAAAAGGCCAAGCATAAACGGAACAAGTGGTGATTTGGTGATGAGTGGCAACACAACAATAACACCTTGTGTTAAGAAAAGGCCTAGTTTAATGCCATCAGAATCCAGGCCTGCCAAAAAGGAGCTGAGAATCAAAGAAGCTTTGTCTAAGATGGCAAGTGCTGTGAAGGCACTGGTGAATAAGAAAGAAAAGAACAACAACAAATCGTTTGAAAATGCATTGAGTGCACTTCAAGCTATGCCAGACATAGATGATGAGCTTGTAATGGAGGCGTGTGATCTTTTGGAAGATGAGAGAAAGACCGAGATATTTTTAGCTTTGAATGTCTCGTTGAGAAAGAAGTGGTTGCTCAGAAAGCTTCGGTGGTAA	2661	0.3998	MSNQNGSSNDRSRMHWTPLMERYFIDLMLEHLQRGNMVGHTFNKDAWTDMLTMFNAKFGSQCDKDVLKARYTNLWKQFNDVKNILSHFGFSWDAVHQRVVADDFVWEDYIKAHPDARCFRTKPVLNFDDLCMIYAHTFAGGRYSLSSHDVSLDDQMPGLHLPSGDGTGSSAVSSNELLKTDWTASMDQFFVELLLDQLGRGNQVNNSFNKKAWTDMLAMFNAKFGSQHGKRILKNRFKKLLKCYRDMTKLLKQGFLWNEQQQMLVADDDVWDAYIKAHPHARTYRLKTLPNYHDLELLFRNVCGDEISNLHQEKNHEAVISETKRGEQKRRRNPSGTDRTRTCWTPPMDACLIDLLLEQVKRGNRLGQTFITRAWNGMTVSFNEQFKSQYDKDVLKNRYKHLKKQFNEVDNLLQQDGFSWDDTKEMVNAEDHVWDAYTKAHPETRSLRVKTLPGYHKLCVIFGEECSDSRHFSLSHDADPSNELLVLITGEQKNATGPNVYDADSTIEWMESMEICFVDLMIEQLNRGKRIGEFFNEYAWTQVTEAFNARLGLQCDKQFLVDQYFCLMKKHNDISKILSHSGFTWDETLQTVTAENDTWDAYIKDHPDAVSYKNRFLYLFNDLCKIFGNKVMQVPDAGEIAQDQHQLIEANDVTVEIDMDGTCEDLAEISNFDISDEDLDWPRELNMDGSPENLVESGSPKISFQDKKKPSVNNMFGMSGILDGTIKNEISNLDTERPKEMGMDITTSGDFAVIGNTQITSQDKKRPSINGTSGDLVMSGNTTITPCVKKRPSLMPSESRPAKKELRIKEALSKMASAVKALVNKKEKNNNKSFENALSALQAMPDIDDELVMEACDLLEDERKTEIFLALNVSLRKKWLLRKLRW*	887

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Lja1g3952	886	MobiDBLite	consensus disorder prediction	315	337	-	-
	Lja1g3952	886	PANTHER	EXPRESSED PROTEIN	770	885	-	-
	Lja1g3952	886	MobiDBLite	consensus disorder prediction	315	341	-	-
	Lja1g3952	886	PANTHER	MYB/SANT-LIKE DNA-BINDING DOMAIN PROTEIN	770	885	-	-
	Lja1g3952	886	PANTHER	MYB/SANT-LIKE DNA-BINDING DOMAIN PROTEIN	1	159	-	-
	Lja1g3952	886	PANTHER	MYB/SANT-LIKE DNA-BINDING DOMAIN PROTEIN	505	660	-	-
	Lja1g3952	886	PANTHER	MYB/SANT-LIKE DNA-BINDING DOMAIN PROTEIN	167	301	-	-
	Lja1g3952	886	PANTHER	MYB/SANT-LIKE DNA-BINDING DOMAIN PROTEIN	324	483	-	-
	Lja1g3952	886	Coils	Coil	824	844	-	-
	Lja1g3952	886	Coils	Coil	392	412	-	-
	Lja1g3952	886	MobiDBLite	consensus disorder prediction	761	782	-	-
	Lja1g3952	886	PANTHER	EXPRESSED PROTEIN	1	159	-	-
	Lja1g3952	886	PANTHER	EXPRESSED PROTEIN	505	660	-	-
	Lja1g3952	886	PANTHER	EXPRESSED PROTEIN	167	301	-	-
	Lja1g3952	886	PANTHER	EXPRESSED PROTEIN	324	483	-	-
	Lja1g3952	886	Pfam	Myb/SANT-like DNA-binding domain	344	437	IPR024752	-
	Lja1g3952	886	Pfam	Myb/SANT-like DNA-binding domain	182	274	IPR024752	-
	Lja1g3952	886	Pfam	Myb/SANT-like DNA-binding domain	15	109	IPR024752	-
	Lja1g3952	886	Pfam	Myb/SANT-like DNA-binding domain	508	602	IPR024752	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Lja1g3952	Lja-Chr1	50124220	50129808	Dispersed

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Lja1g3952	-		-	lja:Lj1g3v1811180.1	1291.95

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Lja1g3952	1	50124220	50129808	Lja1g3952	1	50124220	50129808	ECH