Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g3948 ATGGTGAAAGCAAGTGCAGAATCAGCAGTACCTGAATCAGTGACGGATTCAGTGACCACCACACTCTCCAACCTTCAAGAATTGCGAACTCACTTCCACCAATTCCTCTCTCTCACCGACCCTGAAACTCTCTCCCAACTCCCTCCTCTGCAGCGCGCTCAATCCCTCTTCCTCCTCTCCAAAATCACCTCCACCCTCCTCGCATTGAATCTTAGGTGTTCTGGGATTAACCCAGATGATCATCCTGTTAAATCAGAGCTTGATAGAGTAAACTTGTATGAAGATAAACTGGATCGTTTGCTTGATTTGAGTAAAGCCCCGTTACGGCCCTCTACTACCTTGAACTATCAGGCGGCTACACGCTTCATAGAACACTCTCTGCCTGACCTCACCTCAGAGCAAAGGCAGAATATGAGGAACATAAGTAGGGGGGAGGGACCTAAGAAGAACCATCAGGAGCGGGCTGCTAAAAAGAGGAAGTATCAATCTTCTGAGAAGACATCGGTTCAAGCTGCTGCCCAGGAGTTTCTGGAGAAAGCAGCCAGGGAGATTCTTGGGCATAATGATGGCGGTGTTAAGGGACCCATGCAAATTAACAATTCAGAGGATGGCGATGATGATGAAGAATTACCTGTGTCCTGA 642 0.4798 MVKASAESAVPESVTDSVTTTLSNLQELRTHFHQFLSLTDPETLSQLPPLQRAQSLFLLSKITSTLLALNLRCSGINPDDHPVKSELDRVNLYEDKLDRLLDLSKAPLRPSTTLNYQAATRFIEHSLPDLTSEQRQNMRNISRGEGPKKNHQERAAKKRKYQSSEKTSVQAAAQEFLEKAAREILGHNDGGVKGPMQINNSEDGDDDEELPVS* 214
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g3948 213 MobiDBLite consensus disorder prediction 140 213 - -
Lja1g3948 213 MobiDBLite consensus disorder prediction 142 164 - -
Lja1g3948 213 Pfam Sas10/Utp3/C1D family 22 96 IPR007146 -
Lja1g3948 213 PANTHER NUCLEAR NUCLEIC ACID-BINDING PROTEIN C1D 6 205 - -
Lja1g3948 213 PANTHER SUN-COR STEROID HORMONE RECEPTOR CO-REPRESSOR 6 205 IPR011082 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g3948 Lja-Chr1 50102511 50104266 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g3948 K12592 - gmx:100795174 327.791
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja1g3948 1 50102511 50104266 Lja1g3948 1 50102511 50104266 ECH