Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g3942 ATGGCGTTTTTGAGATCTCTCGCTTTCTCCGCAGTTCTTCTTCTTCTCATTCATGGTGCTCACTGCTTCTACCTCCCCGGCGTCGCTCCACAGGACTTTGTGAAGGGAGATCCATTGCAAGTGAAAGTAAACAAATTAACATCAATAAAGACCCAGCTGCCATACTCATATTATTCACTTCCTTATTGTGCCCCCAAAAAAATTCAGGACAGTGCAGAAAATCTTGGGGAAGTGCTTCGTGGGGACCGCATTGAAAATTCTCGTTATGTGTTCAAAATGCGCGAGCCAGAAATGTGCAATATTGTGTGTAAGATTAAGCTTGATGCTAAAACTGCAAAAGCGTTCAAAGAGAAGATCAATGATGAGTATCGGGTGAACATGATCCTAGATAACCTTCCTCTAGTTGTTCCCATAAAACGGAATGATCAGGATTCTACTGTTTATCAGCTTGGTTTCCATGTTGGACTCAAAGGCCAGTATAGTGGGAGCAAGGAGGAAAAGTTTTTTATTCACAACCATTTGGCATTTACTGTCAAGTATCATAGAGATGTGCAAACTGAATCCTCTAGAATCGTGGGTTTTGAGGTCAAGCCATTCAGTGTCAAACACGAATATGAACAAGGTCAATGGTTTGAAAAGAAGACTCGTTTGACAACCTGTGACCCTCATGCTAAACACACCGTTATCAACTCTAACACTCCTCAAGAGGTTGAAGAGAACAAGGAAATTATCTTCACATATGATGTTGATTTCCAGGAAAGTGATGTGAAGTGGGCTTCAAGATGGGATGCATATTTGCTCATGAATGATGACCAAATCCACTGGTTCTCAATTGTTAACTCCTTAATGATTGTTCTCTTCCTTTCGGGCATGGTGGCAATGATTATGCTGCGGACCCTGTACCGTGACATTGCAAAATATAATGAGCTTGAGACCCAGGAAGAAGCCCAAGAAGAGACTGGTTGGAAACTTGTTCACGGGGATGTCTTTAGGCCCCCTAGCAACTCTGATTTGCTGTGTGTTTATGTTGGGACTGGTGTTCAGTTCTTTTGGATGGTACTAGTAACCATGATGTTTGCCATCCTCGGGTTCCTTTCTCCTTCAAACCGAGGTGGGCTAATGACAGCCATGCTCTTGCTTTGGGTGTTCATGGGAATTTTCGCTGGTTACTCCTCAGCTCGCTTGTACAAAATGTTCAAAGGATCGGACTGGAAAAAGATTTCCCTCAGGACTGCAACCATGTTTCCTGCAACTGTCTCTCTCATCTTCTTTATATTAAATGCTCTCATATGGGGCCAAAAATCATCTGGAGCTGTGCCATTTGGTACTATGTTTGCTCTGGTCTTTTTATGGTTTGGGATCTCAGTCCCACTTGTTTTTGTGGGCGGCTATGTTGGATTTAAGAAGCCTGCGATTGAGAATCCTGTGAAGACAAACAAAATCCCAAGGCAGATACCTGAGCAGGCCTGGTACATGAACCCAGTCTTCTCTGTTTTGATTGGGGGAATACTCCCATTCGGAGCTGTTTTCATTGAACTTTTCTTCATCCTTACCTCAATCTGGTTAAATCAGTTTTACTACATCTTTGGATTCCTATTTTTGGTCCTCCTCATCCTCATTGTCACCTGTGCTGAAATAACCATTGTGCTCTGCTACTTCCAGTTGTGCAGTGAGGATTACTTGTGGTGGTGGCGGTCATACCTCACCTCTGGTTCTTCTGCACTTTACCTCTTTCTTTATGCAACATTCTACTTCTTCACCAAGCTTGAAATCACAAAGTTGGTGTCTGCAATATTTTACTTTGGGTACATGCTTATAGCTTCTTATGCGTTTTTCGTGGTAACCGGTACTATTGGATTTTATGCATGCCTTTGGTTCACTCGGCTCATATACTCCTCAGTCAAAATTGATTAG 1914 0.4263 MAFLRSLAFSAVLLLLIHGAHCFYLPGVAPQDFVKGDPLQVKVNKLTSIKTQLPYSYYSLPYCAPKKIQDSAENLGEVLRGDRIENSRYVFKMREPEMCNIVCKIKLDAKTAKAFKEKINDEYRVNMILDNLPLVVPIKRNDQDSTVYQLGFHVGLKGQYSGSKEEKFFIHNHLAFTVKYHRDVQTESSRIVGFEVKPFSVKHEYEQGQWFEKKTRLTTCDPHAKHTVINSNTPQEVEENKEIIFTYDVDFQESDVKWASRWDAYLLMNDDQIHWFSIVNSLMIVLFLSGMVAMIMLRTLYRDIAKYNELETQEEAQEETGWKLVHGDVFRPPSNSDLLCVYVGTGVQFFWMVLVTMMFAILGFLSPSNRGGLMTAMLLLWVFMGIFAGYSSARLYKMFKGSDWKKISLRTATMFPATVSLIFFILNALIWGQKSSGAVPFGTMFALVFLWFGISVPLVFVGGYVGFKKPAIENPVKTNKIPRQIPEQAWYMNPVFSVLIGGILPFGAVFIELFFILTSIWLNQFYYIFGFLFLVLLILIVTCAEITIVLCYFQLCSEDYLWWWRSYLTSGSSALYLFLYATFYFFTKLEITKLVSAIFYFGYMLIASYAFFVVTGTIGFYACLWFTRLIYSSVKID* 638
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g3942 637 PANTHER TRANSMEMBRANE 9 SUPERFAMILY MEMBER 5 637 - -
Lja1g3942 637 SUPERFAMILY MFS general substrate transporter 275 458 IPR036259 -
Lja1g3942 637 PANTHER TRANSMEMBRANE 9 SUPERFAMILY PROTEIN 5 637 IPR004240 GO:0016021
Lja1g3942 637 Pfam Endomembrane protein 70 54 593 IPR004240 GO:0016021
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g3942 Lja-Chr1 49970702 49974594 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja1g3942 1 637 Miscellaneous Gene Families AT5G10840 83.796 0.0 1102
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g3942 K17086 - gmx:100780976 1167.53