Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g3940 ATGAGAAAACGCACTCTAATAATTGCTCTATTGGTGTTGTTGAGCAACCTTTGTGAGTCAACATCATCCCCTTCCCACTGTAAAGCATGGCTAGTACAATCCATCCCCACCAATATGCCTCACCTCTCTCAAGTTCCTGGTGTCCTCTCCACTGGGGATGTGCTTCGTTGGCTGGCTGAAAACTCCACCAAGAGGCTTGACATAATTGCTCAGTACTGGCAACTGCTAGCTTCTCCTGATGATCCTCACTCCGGAGATTATGGTTACACTCAACCCCAGATGCACCAATTTGGTGCTGATCAAGGTGCTGCTCTTTATCAAGCATTAGATTCTGCTGCAGACCGTGATGTTAGTATCAGGTTACTGTCCCACTCTGGGGTTTATCCAACATTTACACTAGAGCCATCCAAGCTTGCTTCAGGAAGGCCAAATGTTAAGAATGTGACCCTGCTACTAGAGGATTGGTGGGGATCAGGCATTGTCCATGCCAAAGTTTGGATATCCGATAATAGGGATGTGTATATTGGATCTGCTAATAATGACTGGAAATCTCTTACACAGGTCAAGGAAGTTGGAATTTATCTTACCGGTTGTCCTGGAGTTGCTAAAACAGTTGAAATATACTTTAACAATTTATGGACACTAGCATCTCTGAATTCTTCGGCTTACACAAAAACAGTGTTAGATCAACAGTGGCAAGTTGAAAGAAAGGTTCCTTGCTGGTCGCATTTTGTTGATCCTAGAGATAGATGCGAGTCTCCTCTTCCTCAATATCTAGAGACTCCTCATGTTGCAGGATATCCTATTCTGTCTGAGCCTGATATGTTTGACGTTTCAATAAAAACTCCCGGGTATAACTATTCAACAAAGCTCCCCCAAGTCTCTTATCTCTCCTTTGCTCCCCCAGAGCTATCATTTGGCAGTTATCAGGCTGATGAGCAGGCATGGATTGACACAATAAAATCTGTTGAAATGAATGAGACAGTTAGAATCAGTACCATGGACTGGCTGGGCCAATCACAGTTTCTGGACCAAACAATTTACTGGTCATCCTTATCCTCTGCAATATCAGAGGTTGTGTTTTCAAAGCATGCAACAGTGAAGATATTGGTTTCATATTGGGCACACTCCATCAGTAACACAGATGCATACCTGAAGTCTCTTCTCTACTCCAACACTCTATGCTCTTCCTCCAAATACAACAAATGCTCTGGCAAAGTTGAGATCAAATATTATGTGGTTCCTGGTTTCAACAAGACAGGACCTGCCATTGAAGGTGAAAATAGAACAGGAAACATGTACCCTGGTTTCAGCAGAGTCAATCATGGAAAATATGCAGTTAGCAATGTGAGGGCTCACATTGGAACTAGCAATCTTGTTTGGGACTACTTCTATACAACAGCAGGTGTCAGCTTTGGGACATACAACACTGCCATAGTCTCTCAACTTAGTGAAATTTTCGATGCTGATTGGACCTCACCCTATGCTGTTCCAGTTCCAGAGCTGGAGAAAGATCATAAATGTTCAATCTAA 1533 0.4299 MRKRTLIIALLVLLSNLCESTSSPSHCKAWLVQSIPTNMPHLSQVPGVLSTGDVLRWLAENSTKRLDIIAQYWQLLASPDDPHSGDYGYTQPQMHQFGADQGAALYQALDSAADRDVSIRLLSHSGVYPTFTLEPSKLASGRPNVKNVTLLLEDWWGSGIVHAKVWISDNRDVYIGSANNDWKSLTQVKEVGIYLTGCPGVAKTVEIYFNNLWTLASLNSSAYTKTVLDQQWQVERKVPCWSHFVDPRDRCESPLPQYLETPHVAGYPILSEPDMFDVSIKTPGYNYSTKLPQVSYLSFAPPELSFGSYQADEQAWIDTIKSVEMNETVRISTMDWLGQSQFLDQTIYWSSLSSAISEVVFSKHATVKILVSYWAHSISNTDAYLKSLLYSNTLCSSSKYNKCSGKVEIKYYVVPGFNKTGPAIEGENRTGNMYPGFSRVNHGKYAVSNVRAHIGTSNLVWDYFYTTAGVSFGTYNTAIVSQLSEIFDADWTSPYAVPVPELEKDHKCSI* 511
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g3940 510 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 157 184 IPR001736 GO:0003824
Lja1g3940 510 PANTHER PHOSPHOLIPASE D - RELATED 6 503 - -
Lja1g3940 510 Pfam PLD-like domain 102 213 IPR025202 -
Lja1g3940 510 CDD PLDc_vPLD3_4_5_like_2 296 492 - -
Lja1g3940 510 CDD PLDc_vPLD3_4_5_like_1 31 198 - -
Lja1g3940 510 Gene3D Endonuclease Chain A 299 493 - -
Lja1g3940 510 SUPERFAMILY Phospholipase D/nuclease 305 506 - -
Lja1g3940 510 SUPERFAMILY Phospholipase D/nuclease 55 215 - -
Lja1g3940 510 Gene3D Endonuclease Chain A 50 217 - -
Lja1g3940 510 SMART pld_4 437 463 IPR001736 GO:0003824
Lja1g3940 510 SMART pld_4 157 184 IPR001736 GO:0003824
Lja1g3940 510 PANTHER GM01519P-RELATED 6 503 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g3940 K16860 - gmx:100778897 857.055
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja1g3940 1 49951718 49961748 Lja1g3940 1 49951718 49961748 ECH