Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g3931 ATGGACGCAGATACGGCGGCACATCCAATGGAGAGTTCCGAGAAAGAACTGGAGGAGCGCCTTCTCAAAGCTGGCAACGAGCTCGCAGATCCACCGTCGTCGGCGGAGGAGCTCCTCTCAATTCTTGAGCGAGTTGAGAGTTACTTATCAAAGATTGAACAGACACCTAATGAATCTATGCAAACTGCACTCTCTCCAACACTGAAAGCATTAACTGGAGAAATTTTCTTAAAGCATTCAGATGCTGATGTCAAAGTTGCAGTTGCGTCCTGTCTTAGTGAAATAACAAGAATCACTGCACCTGATGCTCCTTATGATGATGATGAAATGAAGGAGGTGTTTCAGTTAATTGTATCTTCATTTGAAAATCTACATGATAAGTCAAGCCGATCATATGCAAAGAAGCTCTCAATGCTTGAAACTGTTGCAAAAGTCAGATCATGCGTAGTAATGCTGGACCTTGAGTGCGATCACCTGATTTTGGAGATGTTTCAGCATTTCTTGAAGGAAATAAGGGAACATCATCCTGAGGATGTTTTTTCATCCATGGAAACAGTTATGACACTTGTTCTGGAAGAAAGTGAAGATATATCCATGGATTTACTTTGTCCACTCCTGGCCACTTTTAAGAAAGACAATGAGGAAGTTTCTCCAATTGCCCTACAATTGGTGGAGAGGGTCCTTGAAAATTGTGCAACCAAGCTTCAACCCTACTTAGTACAAGCAGTCAAAACCTTGGGCATATCTGTGGATGACAGTAAGATACTTGCTAAAATATGCCAAGATGCATCTGATAGCTTCGAAAAAAATGATGTATGTGTTAGTAGTGAGCATGTGGAAGATAAGGGCAAGTCACCAAAGCAATCATCAGAGGAGACAACACAAGCGGCTAAAGGAGATGCAACGGAAGCTGAACATTCTCAACAAGATAATCCTAATGGGAACAGATCGCCGAAGTCAGTCATGAGCAATGGTGTTGCATGTGTCAGAGAAGATAATGCTTTAGCAGATTCGAAGTCCAATAAGCAAGAGGATACTGATTGTTCTGGTCACTCTGAATCTTTGGATGTATCTGGTCAGAGGGAACTCAATAATTTGGACGCTGAAAAGGTTGACAATGATGGAGGAAAACCAAAACAAACCACCAAGAGGCGAAGGAGGAAATCAAGATCTTCAACTAAATCAAGAAAACCTTCTGTTAAAGCAGGGTCACAGGGTCAAGTTGTGGCTCATGAGAAGGAAGCTGAGAAGCCTTCTGTTGTAGCAGGGTCACAGGATCAAGTTGATGCTGATGAGAAGGAAGCTGAGAAAAGGCTGGACTCTGAAGCTCCCAGTTCCCCCCATGAAGACCATTCTGTTGAAGCTGCAGGACCTACAGAGGAAGACGAAGAGACTCATGCTAATATTTCTTCGCCCGAAGCATGCAATGATGATTCTGAAGTTAAAGGTTCTCCTTCAACAAGTGAGAACCTCCCTAACAAAAATCATTCAAAGAAACTTGGAAAAGCAAAAATGAAGGAGGACCCTGCTAAAGAAGGGGCTGCAGAGGATGTTTCAAATAAGATGTCTAAAGGAGCAAGTGATTCAGAAGCCAAACCTGCCAGGCACTCAGTGAAAAAGGCCCTTGGTCGAAACTCTGATGTTAAAGATACTACTGTCGCTCATGAGAAGGAAGCTGAGAAAAGGCTGGACTCTGAAGCTCCCAGTTCCCCCCATGAAGGCCATTCTGTTGAAGCAGCTGGACCTACAGAGGATGACAAAGAGACTCATGCTGATATTTCTTCACCCGAAGCATGCGATGATGAATCTGAAGTTAAAGCTTCTCCTTCAACAAGTGAGAACCTCCATGACCAAATTCGTTCAAAGAAACTTGGAAAAGCAAAAATTAAGGATATCCCTGCTAAAGAAGGGGCTACAGAGGATGTTTCAATTAAGGTGTCTAGAGGAGCAAGTAATTCAGAAGCCAAACCTGCCAGGCGCTCAGTAAAGAAAGCCCTTGGTCGAAACTCTGATGTTAAAGATACTACTGTGGCAGATTTAGTCAAAAAAGGAAGTGGGGCTGCAAGTGATGTTGATGCTAAAAAGAATTCAGCAAAGAAGTTAGGTGAACACAAAAGTGATATTAATGCTAAAAAGCACTCGGCAAAGAAACTAGATGAACAGAAGGGTGGTAGTGGATCCTCTTCAAGGAAGCTGGAGAACAATAAAAAGTCAGGGCGGGGCAAAGCTAACTCTGAAGCAGCTGTTGCAAAATCTTCTGCTATAGATGTTGATAAGGAAATGACGGTGTATTCTCCAAGGTCTGGTACAAAATCCACTAAATCTGAAAATACAGAGGAGATTCCCCTGACAAGTGCAAAGAGGAAACGTACTCCAGGAAAAGAAAAAGAGTCTGATACAAAGAAATATGGTGAAAACCTTGTTGGTTTACGGGTTAAAGTTTGGTGGCCTGAGGATCGTGAGTTTTACACGGGTGTCGTTAATTCATTTGATTCCGCCAGAAAGAAGCACAAGGTGTTGTATGATGATGGTGATGAAGAAACATTAAATCTTAGGGAGGAAAAATGGGGGGTCATTAAAAAAGCTGATTCAGATGCTGATGGGGAAGAAGGAAGTGATCAGGCAGGTCTTGATGGTTCTGCTGAAATGCCACCAACGAAGAAAGGAAAATCAAGCAGTCAATCAACTAAGCAAGGAAAGACGGGTGCTTCTTCCAGTTTTGGAGCAACAGGATCAGGTGGATCTAAAGGCATATCCCTGAAGTCTGGCCATAAGTCCAAAGACGGCAACAAATCCAAAGATTCCAAGGACACCACTCCTAGAAGTGGTGGCAGTAAATATACTCCTGAGCAAAAAATGACTAGCAAATCTAAGACCACACCAAAACCCTCTGCCAAGTCTAAGCAAGAAACCATGAAGAGTGGAAAATCCAAACAAAAAACTCCGAAGACTGCTGCTTCCAAGAGAAAGCAGCCCCCAAAAAGCAATGGAAAGTCCAATGTAAATGATAGTGACAAGGTGAAGTCTGCTTTGAAGAGAAAAGATTCAGAGGATGAGAGCTCAGATGTTTCATCAAGAGAGGTAGAAGATACAAAGGGCAAGTTGTCAATTTCATCTAAGGCACAAGGAAGTGGTGCCAAGCGTGAAAAGAAGCGTCAAAGAAGCTAG 3168 0.428 MDADTAAHPMESSEKELEERLLKAGNELADPPSSAEELLSILERVESYLSKIEQTPNESMQTALSPTLKALTGEIFLKHSDADVKVAVASCLSEITRITAPDAPYDDDEMKEVFQLIVSSFENLHDKSSRSYAKKLSMLETVAKVRSCVVMLDLECDHLILEMFQHFLKEIREHHPEDVFSSMETVMTLVLEESEDISMDLLCPLLATFKKDNEEVSPIALQLVERVLENCATKLQPYLVQAVKTLGISVDDSKILAKICQDASDSFEKNDVCVSSEHVEDKGKSPKQSSEETTQAAKGDATEAEHSQQDNPNGNRSPKSVMSNGVACVREDNALADSKSNKQEDTDCSGHSESLDVSGQRELNNLDAEKVDNDGGKPKQTTKRRRRKSRSSTKSRKPSVKAGSQGQVVAHEKEAEKPSVVAGSQDQVDADEKEAEKRLDSEAPSSPHEDHSVEAAGPTEEDEETHANISSPEACNDDSEVKGSPSTSENLPNKNHSKKLGKAKMKEDPAKEGAAEDVSNKMSKGASDSEAKPARHSVKKALGRNSDVKDTTVAHEKEAEKRLDSEAPSSPHEGHSVEAAGPTEDDKETHADISSPEACDDESEVKASPSTSENLHDQIRSKKLGKAKIKDIPAKEGATEDVSIKVSRGASNSEAKPARRSVKKALGRNSDVKDTTVADLVKKGSGAASDVDAKKNSAKKLGEHKSDINAKKHSAKKLDEQKGGSGSSSRKLENNKKSGRGKANSEAAVAKSSAIDVDKEMTVYSPRSGTKSTKSENTEEIPLTSAKRKRTPGKEKESDTKKYGENLVGLRVKVWWPEDREFYTGVVNSFDSARKKHKVLYDDGDEETLNLREEKWGVIKKADSDADGEEGSDQAGLDGSAEMPPTKKGKSSSQSTKQGKTGASSSFGATGSGGSKGISLKSGHKSKDGNKSKDSKDTTPRSGGSKYTPEQKMTSKSKTTPKPSAKSKQETMKSGKSKQKTPKTAASKRKQPPKSNGKSNVNDSDKVKSALKRKDSEDESSDVSSREVEDTKGKLSISSKAQGSGAKREKKRQRS* 1056
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g3931 1055 MobiDBLite consensus disorder prediction 380 395 - -
Lja1g3931 1055 MobiDBLite consensus disorder prediction 427 468 - -
Lja1g3931 1055 Pfam Sister chromatid cohesion protein PDS5 protein 37 241 - -
Lja1g3931 1055 SMART TUDOR_7 804 859 IPR002999 -
Lja1g3931 1055 MobiDBLite consensus disorder prediction 616 642 - -
Lja1g3931 1055 MobiDBLite consensus disorder prediction 781 803 - -
Lja1g3931 1055 MobiDBLite consensus disorder prediction 886 919 - -
Lja1g3931 1055 MobiDBLite consensus disorder prediction 859 1055 - -
Lja1g3931 1055 PANTHER TRANSCRIPTIONAL REGULATOR 12 565 - -
Lja1g3931 1055 PANTHER TRANSCRIPTIONAL REGULATOR 562 1021 - -
Lja1g3931 1055 MobiDBLite consensus disorder prediction 528 571 - -
Lja1g3931 1055 Gene3D - 795 855 - -
Lja1g3931 1055 MobiDBLite consensus disorder prediction 941 968 - -
Lja1g3931 1055 MobiDBLite consensus disorder prediction 335 351 - -
Lja1g3931 1055 SUPERFAMILY ARM repeat 41 252 IPR016024 -
Lja1g3931 1055 MobiDBLite consensus disorder prediction 277 803 - -
Lja1g3931 1055 MobiDBLite consensus disorder prediction 921 940 - -
Lja1g3931 1055 PANTHER ANDROGEN INDUCED INHIBITOR OF PROLIFERATION AS3 / PDS5-RELATED 562 1021 IPR039776 GO:0007064
Lja1g3931 1055 CDD TUDOR 809 851 IPR002999 -
Lja1g3931 1055 MobiDBLite consensus disorder prediction 469 494 - -
Lja1g3931 1055 MobiDBLite consensus disorder prediction 289 322 - -
Lja1g3931 1055 MobiDBLite consensus disorder prediction 1 25 - -
Lja1g3931 1055 MobiDBLite consensus disorder prediction 765 780 - -
Lja1g3931 1055 MobiDBLite consensus disorder prediction 693 726 - -
Lja1g3931 1055 SUPERFAMILY Tudor/PWWP/MBT 806 849 - -
Lja1g3931 1055 MobiDBLite consensus disorder prediction 578 607 - -
Lja1g3931 1055 MobiDBLite consensus disorder prediction 363 379 - -
Lja1g3931 1055 MobiDBLite consensus disorder prediction 657 678 - -
Lja1g3931 1055 MobiDBLite consensus disorder prediction 988 1004 - -
Lja1g3931 1055 MobiDBLite consensus disorder prediction 1005 1034 - -
Lja1g3931 1055 MobiDBLite consensus disorder prediction 501 518 - -
Lja1g3931 1055 MobiDBLite consensus disorder prediction 1 34 - -
Lja1g3931 1055 PANTHER ANDROGEN INDUCED INHIBITOR OF PROLIFERATION AS3 / PDS5-RELATED 12 565 IPR039776 GO:0007064
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g3931 Lja-Chr1 49850906 49860008 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g3931 - - lja:Lj1g3v1819810.1 887.871