Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Lja1g3930 | ATGGCTCTCGGATTCTTCGCTTTCGCTCTCTTCCTCTTCCTCTCCCTCGATTCTGAATTCTCCTTCTCTCCTTCTTCCTCCGCTTCCGCCTCCGCATCTACCTCCGCCGCTTCCTCCGAAGGCGTCGAGGTGCAGGTTACTTATGGATCCGTTTTGAAGCTTATGCACGAGAAGACGAAATTCCGGTTGCATTCTCATGATGTGCCGTATGGTTCTGGAAGTGGACAGCAATCTGTTACTGGTTTTCCTGATGTTGATGATGCCAACAGTTACTGGATTGTGAGGCCTGAGCCAGGAACTGGTGCTAAACAAGGTGATGCCATAAAAAGTGGCACCATCATTAGATTGCAGCATATGAGGACCAGGAAGTGGCTGCACAGCCATTTGCATGCATCCCCAATATCAGGCAATCTCGAGGTGAGTTGCTTTGGAGGAGAGTCTGAATCTGACACTGGAGACTATTGGAAGGTTTTCATAGAAGGAAGTGGAAAGACTTGGAAGCAGGATCAGAAGATTCGGCTTCAGCATATTGACACCGGAGGCTATCTACATAGTCATGATAAGAAATACAGTCGGATTGCTGGGGGACAGCAGGAGGTATGTGCAGTTCGTGAAAAGCGTGCGGACAATGTCTGGTTGGCAGCTGAAGGTGTCTATCTTCCGGTTACTGAAAGCAAATAG | 681 | 0.4875 | MALGFFAFALFLFLSLDSEFSFSPSSSASASASTSAASSEGVEVQVTYGSVLKLMHEKTKFRLHSHDVPYGSGSGQQSVTGFPDVDDANSYWIVRPEPGTGAKQGDAIKSGTIIRLQHMRTRKWLHSHLHASPISGNLEVSCFGGESESDTGDYWKVFIEGSGKTWKQDQKIRLQHIDTGGYLHSHDKKYSRIAGGQQEVCAVREKRADNVWLAAEGVYLPVTESK* | 227 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Lja1g3930 | 226 | ProSiteProfiles | MIR domain profile. | 43 | 97 | IPR016093 | - | |
| Lja1g3930 | 226 | PANTHER | BNAA09G55850D PROTEIN | 1 | 225 | - | - | |
| Lja1g3930 | 226 | ProSiteProfiles | MIR domain profile. | 105 | 160 | IPR016093 | - | |
| Lja1g3930 | 226 | SMART | mir_2 | 105 | 160 | IPR016093 | - | |
| Lja1g3930 | 226 | SMART | mir_2 | 43 | 97 | IPR016093 | - | |
| Lja1g3930 | 226 | SMART | mir_2 | 163 | 217 | IPR016093 | - | |
| Lja1g3930 | 226 | Pfam | MIR domain | 77 | 210 | IPR016093 | - | |
| Lja1g3930 | 226 | Gene3D | - | 29 | 226 | - | - | |
| Lja1g3930 | 226 | SUPERFAMILY | MIR domain | 44 | 217 | IPR036300 | - | |
| Lja1g3930 | 226 | ProSiteProfiles | MIR domain profile. | 163 | 217 | IPR016093 | - | |
| Lja1g3930 | 226 | PANTHER | STROMAL CELL-DERIVED FACTOR 2-LIKE PROTEIN | 1 | 225 | - | - |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Lja1g3930 | - | - | gsj:114414928 | 386.341 |