Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g3919 ATGACATCCTCATTCCCTTCTTGCTTCCGCCCTTCCCCAACCACTGACCACTCTCCTCCTCCTCTTCCGCCGCCGTCACCACCTTCCACCAACCCCAACCTCTCCACCTATCTCTACAACACCGACATAGGCCCAGTTTCCCTCACCTGGTCACGCTCCATCATGGGTCGCTCCCTCCACGTTCACCTCCACCACCACCCCTTCGATTCCCCTCTCCCTCTCTCCTCCTCCTCCTCCTCCTCCTCCTCCTTCCGCCTCCACATCAAGCCCTTCATCTTCTGGAAAAAGCACGGCACCAAGAAGCTCTCCCCCAACACCCACCTCTTCTGGAACCTCTCCAAGGCAAAATTCGGGTCAGGACCCGAACCCAACTCCGGCTTCTACGTCGCGGTGGTCGTCGACAGCGAGATGACCCTCCTCGTCGGCGATTCCAGTAGAGACGCCTACACCAAATCCAAAGCCCACGAACCAAAAACCGGTCAATCGCTTCTGCTGAAGAAGGAACACGTCCTCGCCAACAAAATCTACACCACCAGAGCTAAATTCGGTGGTAGAATGAGAGAGATTCAGATCGATTGTGACAGTTCAAGGCTCTGTTTCAGCGTCGACGGTGAGAAAGTGATGCAGATTAAGCGGTTGAAGTGGAAATTCAGAGGGAACGAGAGAGTGGAAGTTGATGGGGTTCCGATTCAGATCTCATGGGACGTTTACAATTGGCTGTTTCAGAAGGATAACAGTGATGGGCACGCCATTTTCATGTTCAAATTCGAGGAGGAAGAAGAAGATGAAGAGGATCAGCGAGGGAAAGAGAGGAATCTGGTGAATTTGTGGACGCACCAGAACTTGAATTTGGGGGTTTCTGAATGGGGGAAAGTTGGGTCGTCTTCGTCAGCGTCAATGGCGTCTTCCGGTGGGTCTTTTGGCGGCAGCTCCTCCGTGATGGAATGGTCCAGTGTGGAGGAGAATGAGTTGGTTGTTCCCATTGGGTTTTCTTTGCTTGTTTATGCTTGGAAACGATGA 1020 0.5284 MTSSFPSCFRPSPTTDHSPPPLPPPSPPSTNPNLSTYLYNTDIGPVSLTWSRSIMGRSLHVHLHHHPFDSPLPLSSSSSSSSSFRLHIKPFIFWKKHGTKKLSPNTHLFWNLSKAKFGSGPEPNSGFYVAVVVDSEMTLLVGDSSRDAYTKSKAHEPKTGQSLLLKKEHVLANKIYTTRAKFGGRMREIQIDCDSSRLCFSVDGEKVMQIKRLKWKFRGNERVEVDGVPIQISWDVYNWLFQKDNSDGHAIFMFKFEEEEEDEEDQRGKERNLVNLWTHQNLNLGVSEWGKVGSSSSASMASSGGSFGGSSSVMEWSSVEENELVVPIGFSLLVYAWKR* 340
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g3919 339 PANTHER EXPRESSED PROTEIN 2 338 IPR008586 -
Lja1g3919 339 MobiDBLite consensus disorder prediction 13 31 - -
Lja1g3919 339 Pfam Plant protein of unknown function (DUF868) 32 338 IPR008586 -
Lja1g3919 339 PANTHER OS08G0422401 PROTEIN 2 338 - -
Lja1g3919 339 MobiDBLite consensus disorder prediction 1 34 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g3919 Lja-Chr1 49642187 49643720 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja1g3919 5 261 EF-hand Containing Proteins AT5G28150 35.926 8.34e-55 179
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g3919 - - cam:101507611 456.832