Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g3905 ATGAAATTTGGTGGCTGCAATTATTCTCAGTTACTTTTTATGAAAGTTGGTGGCTGCAGTTACTTATACAATACAATAAAAGAAAGACAAGAAGGAGCAATCATGTGGAAGGTAGCAAATGCATCGGAATGTCTGGTGATCACCGGAATCGGAATTGACGACATCAAGTTGGCCAAGAAAGCATTCATTTACCCTGGCCAATCATGTACCGTCGTCGACCTCTCTCCGGTGAACTACACATTCGAGGTCCAAGCCATGAGTGCTGAGAAGCTCCCATTCGTCCTCCCTGCTGTCTTCACTATCGGCCCTCGTGTCGACGACAACGAAAGCCTCCTTAAGTACGCCAAGCTCATCTCCAAACATGACAAGCTCTCTAACCACGTGAAAGAGCTTGTCCAGGGGATCATCGAGGGTGAGACGCGTGTTCTCGCTGCCTCGATGACCATGGAGGAGGTTTTCAAAGGCACAAAAGAATTCAAGCATGAAGAAGTGTTCGAAATGGTGCAGCTTGAGCTTAACCAGTTTGGCCTTCTCATCTACAATGCCAATGTCAAGCAGCTCGTGGATGTCCCCGGCCACGAGTACTTCTCTTACTTGGGTCAGAAGACACAGATGGAGGCCGCGAACCAAGCCAAGGTGGATGTGGCTGAGGCGAGGATGAAAGGGGAGGTTGGGGCAAAGTTGAGAGAAGGGCAAACGCTTCAGAATGCGGCAAAGATTGACGCGGAGACGAAGGTTATAGCGACTCAGAGGCAAGGGGAGGGGAAGAAGGAGGAGATAAAGGTGAGGACGGAGGTGAAGGTGTTTGAGAATCAAAAGGAGGCTGATGTTGCAGAGGCTAACTCTGAGCTTGCTAAGAAGAAGGCTGTGTGGGCTCAGGCAGCGCAGGTGGCGGAGGTGGAGGCCGCAAAGGCGGTGGCGCTCAGGGAGGCGGAGTTGCAAGGGGAGGTGGAGAGGATGAATGCTCTGACCATGACTGAGAAACTTAAGGCTGAGTTCCTCACCAAGGCAAGCGTGGAGTATGAAACCAAGGTACAAGAGGCAAACTGGGATCTGTACAAGAAGCAAAAAGCAGCTGAAGCAATTCTCTTTCAGAAGGAGAAAGAGGCAGAAGCACAGAAAGCATTAGCAGAAGCAGCATTTTATAGTCGCCAGCAAGCAGCAGAAGCAGAGCTAGTCTCAAAGAAAAAAGAGGCAGAGGGTCTTATAGCACTTGGTCAAGCACAAGGAGCATATTTGAAGTCACTTATGGGTGCACTTGGCAACAACTATGCACAGCTAAGGGACTACTTGATGATTAATGGTGGCATGTATCAAGAGCTTGCAAAGATCAATGCTGATGGAATTCGTGGGCTTCAACCTAAGATTAGTATTTGGAATAATGGTAATGGTGGTGCTGAAGGAACTGATGGAAGTGGTGCCAATGGTATGAAAGATGTTGCTAGTATCTACAAGATGTTGCCACCTCTGTTCAACACAGTTCATGAGCAAACTGGTATGCTGCCACCAGCTTGGATGGGAACCATCCCTGACAAAACTTCTGAGTCTCTTAACTTTTCACATCTCACATATACATCACTCTTTGGGGAAAAAGAAGGAACAAACATGTATAAGGTAGCAAAAGCATCAGAATGTCTGGCCATCACAGGCGTTGGAATCAATGACATAAAGCTGGCAAAGAAATCATGGATCCTCCCCGGCCAATCCTGCACCGTTGTTGACCTCACTCCGGTGAACTACACCTTCGAGGTCCAAGCCATGAGCGCCGAGAAGCTCCCTTTTAACCTCCCGGCCGTCTTCACAATCGGCCCCAGGGTCGATGATGATGAAAGCCTCCTCAAATATGCCAAGCTCATCTCCAAACATGACAAGCTCTCCAACCACATCAATGAGCTCGTCCAGGGCATCATCGAGGGCGAGACACGTGTTCTCGCCGCCTCAATGACTATGGAGGAGGAAGTGTTCGGGAAGGTGCAGCTCGAGCTAAACCAATTCGGCCTTCTCATCTACAATGCCAACGTGAAGCAACTCGTGGATGTCCGTGGTCATGAGTACTTCTCTTACTTGGGCCAGAAGACACAAATGGAGGCCGCAAACCAAGCTAAGGTGGATGTGGCTGAAGCGAGGATGAAAGGGGAGGTAGGGGCGAAGTTGAGGGATGGGCAAACACTTCAAAATGCGGCAAAGATTGATGCGGAGACAAAGATCATAGCAACACAGAGGCAAGGGGAGGGGCAGAAGGAGGAGATAAAGGTGAGGACGGAGGTGAAGGTGTTTGAGAATCACAAGGAGGCTGATGTGGCAGAGGCTAACTCTGAGCTTGCTAAGAAGAAGGCTGCATGGGCCCAAGCGGCGCAGGTTGCAGAGGTGGAGGCGGCCAAGGCGGTGGCACTAAGGGAGGCGGAGTTGCAAGGGGAGGTTGAGAGGATGAATGCTCTTACTAGGACTGAGAAGCTTAAGGCTGACTTCCTCACCGAGGCAAGCGTTGAATATGAAACTAAGGTACAAGAGGCGAACTGGGATCTATACAAGAAACAAAAAGCATCTGAGGCAATTCTGTTTGAGAAGGAGAAAGAAGCTGAAGCACAGAAAGCATTAGCAGAAGCAGCATTTTACACTCGCCAGCAAGCAGCAGAAGCAGATCTATCACTTAAGGATGCACTTGGCAGCTATGAATATCTAAGAGACTACTTGATGATAAATAGTGGCATGTATCAAGAGCTTGCAAAGATCAATGCTGAGGGAATTCGTGGGCTTCAGCCTAAGATTAGTATTTGGAATAATGGTAATGGTGGAGCTGAAGGAACTGATGGAAGTGGTGCCATTGGCATGAAAGAGGTTGCTAGTGTCTACAAGATGTTGCCACCTCTGTTCAATACAGTTCATGAGCAAACTGGCATGCTTCCACCAGCTTGGATGGGAACCTTCCCTGACAAAACTCGTGTCACCTCTGTTCAAGACACTTCTGTTCAAGACACTTCTTAG 2985 0.4888 MKFGGCNYSQLLFMKVGGCSYLYNTIKERQEGAIMWKVANASECLVITGIGIDDIKLAKKAFIYPGQSCTVVDLSPVNYTFEVQAMSAEKLPFVLPAVFTIGPRVDDNESLLKYAKLISKHDKLSNHVKELVQGIIEGETRVLAASMTMEEVFKGTKEFKHEEVFEMVQLELNQFGLLIYNANVKQLVDVPGHEYFSYLGQKTQMEAANQAKVDVAEARMKGEVGAKLREGQTLQNAAKIDAETKVIATQRQGEGKKEEIKVRTEVKVFENQKEADVAEANSELAKKKAVWAQAAQVAEVEAAKAVALREAELQGEVERMNALTMTEKLKAEFLTKASVEYETKVQEANWDLYKKQKAAEAILFQKEKEAEAQKALAEAAFYSRQQAAEAELVSKKKEAEGLIALGQAQGAYLKSLMGALGNNYAQLRDYLMINGGMYQELAKINADGIRGLQPKISIWNNGNGGAEGTDGSGANGMKDVASIYKMLPPLFNTVHEQTGMLPPAWMGTIPDKTSESLNFSHLTYTSLFGEKEGTNMYKVAKASECLAITGVGINDIKLAKKSWILPGQSCTVVDLTPVNYTFEVQAMSAEKLPFNLPAVFTIGPRVDDDESLLKYAKLISKHDKLSNHINELVQGIIEGETRVLAASMTMEEEVFGKVQLELNQFGLLIYNANVKQLVDVRGHEYFSYLGQKTQMEAANQAKVDVAEARMKGEVGAKLRDGQTLQNAAKIDAETKIIATQRQGEGQKEEIKVRTEVKVFENHKEADVAEANSELAKKKAAWAQAAQVAEVEAAKAVALREAELQGEVERMNALTRTEKLKADFLTEASVEYETKVQEANWDLYKKQKASEAILFEKEKEAEAQKALAEAAFYTRQQAAEADLSLKDALGSYEYLRDYLMINSGMYQELAKINAEGIRGLQPKISIWNNGNGGAEGTDGSGAIGMKEVASVYKMLPPLFNTVHEQTGMLPPAWMGTFPDKTRVTSVQDTSVQDTS* 995
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g3905 994 CDD SPFH_flotillin 63 210 - -
Lja1g3905 994 SUPERFAMILY Band 7/SPFH domain 67 207 IPR036013 -
Lja1g3905 994 Coils Coil 365 385 - -
Lja1g3905 994 PANTHER FLOTILLIN-RELATED 537 976 IPR027705 -
Lja1g3905 994 PANTHER FLOTILLIN-RELATED 36 510 IPR027705 -
Lja1g3905 994 Gene3D Band 7 domain 72 190 IPR036013 -
Lja1g3905 994 Gene3D Band 7 domain 573 680 IPR036013 -
Lja1g3905 994 SUPERFAMILY Band 7/SPFH domain 568 697 IPR036013 -
Lja1g3905 994 CDD SPFH_flotillin 563 700 - -
Lja1g3905 994 Pfam SPFH domain / Band 7 family 61 218 IPR001107 -
Lja1g3905 994 Pfam SPFH domain / Band 7 family 561 708 IPR001107 -
Lja1g3905 994 PANTHER FLOTILLIN-LIKE PROTEIN 3 537 976 - -
Lja1g3905 994 PANTHER FLOTILLIN-LIKE PROTEIN 3 36 510 - -
Lja1g3905 994 Coils Coil 855 875 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g3905 K07192 - bvg:104882957 1231.47