Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g3904 ATGTTAAGTTACCACCGGCCACTGCATTTTTGTTTTCTCCTCACATTTTTCTCACTTCACTCTTCCACCTCCTTTTCCCTCTCACCTCTGCAGACACAACTCACTTCAGCAGGAAATGAGGGAAAAGCTTTGAGTTTTTCTAGGTTGGAGGTATTTGCTGCTGAACCTTTTGAGAACTCACCACTTCCCTTAGCTGCAGAGAGAACAAGAAGAAAAGATCCTCTAAACAGCTTCAATCAGTACTTAAGTGGATGGAATATCAGTGACCACCATTATTGGGCTTCAGCGGCATATACTGCAGTTCCTGTGTTCATTATTGCTGCAATCTGGTTCTTGGGCTTTGGCTTGTGCTTATTGGTCCTCCTTGTTTGTTACTTCTGTCGTAATCGAGAGCCTTACGGTTACTCTCCAACATGCTACGCTCTTTCCCTGATTCTCCTCATATTGTTCACATTTCTAGCAATGATTGGATGTGCAATTCTTTATATTGGGCAAGGAAGTTTTCACCACAGCACGACACTGACATCGCAATATGTTGTGCATCAAGCTGATTCTGCTGTGGATAAACTGAAGAATGTGTCTGATTATCTTGCTCAAGCTAAGCAAGTTGGAATTGATCGTGTTTTTCTCCCTTCTAATGTGCAAACTGATATTGATGAAGTAGAAACAAATATCAATACCTCTGCGGGCACAATTGCGGATAAGACCAAGGAGAACTCAGACAACATACAAGATCTCTTAGATTCTGTGAGGCTGGCGCTTATCACAATAGCTGCAGTTATGCTAGTCTTGACATTTCTTGGGTTTTTATTCTCAATTTTTGGGATGCAGATTCTTGTGTATATCTTGGTATTCGCGGGATGGTTTCTTGTTACTGGCACCCTTATATTGTGTGGCTGCTTCCTTATTCTCCATAATGTAACAGCAGACACTTGTGTAGCCATGGATGAGTGGATTCAGTATCCTGCTGCAAATACTGCTCTGGATGATATTCTGCCCTGTGTGGACAATGCCACTGCACAAGAAACATTTCTACGAAGCAAAGAAGTAACTTCTGAACTAGTGAATTTAGTGAACCAGGTTATAACCAATGTCTCCAACATAAATTTCGCCCCCAATTTCACGCCACTGTTCTACAATCAATCCGGCCCTGTCATGCCGCTCCTCTGCAATCCGTTTCATCCTGACATGACAGATAGACTATGTGACCCTGGTGAAGTGACCCTAAGCAATGCAACACAGGTGTATGGCAACTTTGTGTGCCAAGTTTCACCCTCAGATATTTGCACAACACAAGGGCGTTTGACACCAACCTTCTATAATCAGATATCCACAGGAATAAACGTGGGAAACGCCTTGTATAGTTATGCTCCTTCTTTGGTTGAGTTACAAGACTGCACCTTTGTTCGTGAAACTTTCAGTGACATTTCAAGGGAGCATTGTCCTGGTCTACGACGTTATAGTAAATGGATCTATGCTGGATTGGTGATGGTTTCCTTTGCTGTGATGTTCTCCTTGATCTTCTGGGTTGTGTATGGAAGAGAACGAAGATATCGTCTATATACAAAAGAAACAAAAGAGTTAACACCAGTACCAGGACGAGCACCATCAACTTCACGAGCATTAGTACTAAATCCATGA 1641 0.4241 MLSYHRPLHFCFLLTFFSLHSSTSFSLSPLQTQLTSAGNEGKALSFSRLEVFAAEPFENSPLPLAAERTRRKDPLNSFNQYLSGWNISDHHYWASAAYTAVPVFIIAAIWFLGFGLCLLVLLVCYFCRNREPYGYSPTCYALSLILLILFTFLAMIGCAILYIGQGSFHHSTTLTSQYVVHQADSAVDKLKNVSDYLAQAKQVGIDRVFLPSNVQTDIDEVETNINTSAGTIADKTKENSDNIQDLLDSVRLALITIAAVMLVLTFLGFLFSIFGMQILVYILVFAGWFLVTGTLILCGCFLILHNVTADTCVAMDEWIQYPAANTALDDILPCVDNATAQETFLRSKEVTSELVNLVNQVITNVSNINFAPNFTPLFYNQSGPVMPLLCNPFHPDMTDRLCDPGEVTLSNATQVYGNFVCQVSPSDICTTQGRLTPTFYNQISTGINVGNALYSYAPSLVELQDCTFVRETFSDISREHCPGLRRYSKWIYAGLVMVSFAVMFSLIFWVVYGRERRYRLYTKETKELTPVPGRAPSTSRALVLNP* 547
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g3904 546 PANTHER TRANSMEMBRANE PROTEIN DDB_G0292058 5 525 IPR040283 -
Lja1g3904 546 PANTHER TRANSMEMBRANE PROTEIN 5 525 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g3904 Lja-Chr1 49241298 49245668 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g3904 - - gmx:100816139 843.573