Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g3898 ATGGACGATCCTCCTTCCAAACACCGCATCCTCACTCTCCTCACCGCTCTCCTCGAAGCATCCAAAGATCTCCACACCAAAACCACCCCCTTCTCCACCCTCAACCCAGACTCCATTGACACTCTCCTCAACCTCGAAACCAAAGCAATCACCGTCTTCTCAACCGACCCAAACCTCCACCCCCTCACCCACACCCTCTCCACCCTCAAAACCCTCATCGAGAATCTCCACAGCTGTCAAGGCTACAACCCGAACTCCCTCCTCCGCCGCCACATCACCACCTACAAAATCTCCCAAACCGCCATCACATTCGAGGCCGAAATCCAAGCCTACATCGACCGCGTCACCGTTCACGACCTCGTGACAACGCTACAACAGCCTCACGGTGAGGATGAGCAGGTGAACGCGCTGGTTGAGTTCGAGCAGAGGTTGGCTCAGGGTTTTGATTTGGGGTTTCAGGATCTGGTGTTGCGGGCGAAGGTGTTCACGGTTCTGGAGCGGACGTTGTTTGAGCCGCTGAGCTCGAAGAGGGTGAAGGAGGAAGCTGCGGTGGCCATTGCTGCTCTGGTAAAATTCAACAAGAATGTGTTTGTTGGGTTGGTGTTGATGGGTCCTACCATCAAGGCGTTGATAGCTATGGCTTCTACGTGTTCGGTTCAGGTTCTGACGTCGTTGGTGAGGTTCATTCGGAGTCCTTTGGTGGATGAAATTTTGTCACATGGAGAGATTCCAACGATTGTTGGGTTTTTAAGGTTACAGGATTTGTCTCTTTGTGCTGCGGCGTTGGATTGTGTTATGGAAATTGCATACATTGGGAGGATGGAAGTGGTTGAAGCTATGTTTCAGGAGAATTTGGTGAAGATACTCATGGAGTTGCAGAGGAAGGGTAGTGAAAGTGGGGATTCTTCATATGATGTGGAGGAGAACAGAGGAAGAGAAAAATATGAGGGTGTGGAGGAGTTTGATGCTGTTTTCGCTGGTTGTGTTTCGAGGTTTGCTATTCAATTGGAAGTGGGGGAAGGTTTGACATCTGAGGAGAAAACAGAGGTGAAATTGGAGGTATTGAAGATGGTGAAGAAGGCTTCTCAGTCAGATGCAGAGTGCGCCACCGTTAGCGCCGAGATACTGTGGGGTTCTACGCCATAA 1146 0.507 MDDPPSKHRILTLLTALLEASKDLHTKTTPFSTLNPDSIDTLLNLETKAITVFSTDPNLHPLTHTLSTLKTLIENLHSCQGYNPNSLLRRHITTYKISQTAITFEAEIQAYIDRVTVHDLVTTLQQPHGEDEQVNALVEFEQRLAQGFDLGFQDLVLRAKVFTVLERTLFEPLSSKRVKEEAAVAIAALVKFNKNVFVGLVLMGPTIKALIAMASTCSVQVLTSLVRFIRSPLVDEILSHGEIPTIVGFLRLQDLSLCAAALDCVMEIAYIGRMEVVEAMFQENLVKILMELQRKGSESGDSSYDVEENRGREKYEGVEEFDAVFAGCVSRFAIQLEVGEGLTSEEKTEVKLEVLKMVKKASQSDAECATVSAEILWGSTP* 382
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g3898 381 PANTHER ARMADILLO-TYPE FOLD PROTEIN-RELATED 6 381 - -
Lja1g3898 381 PANTHER - 6 381 - -
Lja1g3898 381 Gene3D - 62 301 IPR011989 -
Lja1g3898 381 SUPERFAMILY ARM repeat 116 297 IPR016024 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g3898 Lja-Chr1 49179216 49182173 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g3898 - - mtr:MTR_3g106630 464.536