Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g3896 ATGGAGATTCCTCATCGACGCTTCTTCTGTGCAACTCTGTTACTCTTTCTCGCATCGTTCGCCGTCGTTTACACCGTGCTTCATCCATCGCAGTTGAAGCCACCTCACCTCCTCAAAACAAAGGTTTCCGGCGAGAATCACCTCCGTGCTGTTGGAAACGCCGCCGGCGCCGGTGCTCACTCAAACACCACCGCCGTAACCAGGAAGAGAGAAAAGCGAGAAGAAGAACTAGCACGAGCAAGAGCTTCAATGCGGAGGGTGGTGTTACGAGATAACAGAACCGTTCTATCTTATCGTAACGACGACGATAACTTCCCAACTGGATCTGTTTATCGTAACCCGCGATTATTTTACCGGAGCTACTTGGAGATGGAGAAGGTATTCAAGGTGTACGTATACCCAGATGGGGACCTGCCAATTGTTCACGATGGCCCTTGCAAGGACCTATACTCGATTGAAGGGAGGTTCCTCCATCAGATGGAACACGAAGTTGGAAGGTTCAGGACATATGACCCTAACGCAGCTCACGTTTACTATTTCCCATTCAGCGTCACATGGATGGTCAAGTATCTCTACATAGCCAATTACGACGTCACTCCTATACAGCGGTTTGTCGCTGATTATGTGAGAGGGATTTCCACGAGGCACCCTTTCTGGAACAGAACTCATGGTGCTGATCACTTTATGCTCGCTTGTCATGATTGGGGCCCTCATGCATCAAGGGGCGATCCTTTCCTTTACAATACCTCAATCCGGGTCTTGTGCAATGCCAACACTTCTGAAGGTTTCAATCCTCAAAAGGATGTAACTTTGCCAGAAATCCACCTATATGGTGGTGAAGTGAACTCTAAACTCCTGTCACCTCCGCCTGACAGCGCCCCACGCCCCTATCTCGCCTTCTTTGCGGGCGGCGAGCACGGCTCAATCCGCTCCACTCTGCTCCACCACTGGAAAAACAGAGACAATGATATTATGCAAGTCCATGAGTATCTCCCAAAAGGCCTAGACTACTATTCCTTCATGCTCACATCCAAGTTCTGCCTTTGTCCAAGCGGGTTTGAAGTGGCTAGCCCGAGAATTGTGGAGTCAATTTACGCCGAGTGCGTGCCGGTGATCCTATCAGAGCATTTTGTGTTGCCTTTCAGTGATGTTCTGCAATGGGATGCGTTTTCAGTGCAGATTAATGTTTCAGATATTCCAAGGCTAAAAGAGATTCTCAGTGCAATTCCAGAGAGCGAGTACTGGAAGCTCAAGCAGGGAGTGAGAGCTGTCAGGAAACATTTTACTCTGAATCAGCCTGCTAAAAGATTTGATGTTTTTCACATGATCTTGCACTCTATATGGCTGAGGAGATTGAATATACAACTCAGGTAG 1374 0.4833 MEIPHRRFFCATLLLFLASFAVVYTVLHPSQLKPPHLLKTKVSGENHLRAVGNAAGAGAHSNTTAVTRKREKREEELARARASMRRVVLRDNRTVLSYRNDDDNFPTGSVYRNPRLFYRSYLEMEKVFKVYVYPDGDLPIVHDGPCKDLYSIEGRFLHQMEHEVGRFRTYDPNAAHVYYFPFSVTWMVKYLYIANYDVTPIQRFVADYVRGISTRHPFWNRTHGADHFMLACHDWGPHASRGDPFLYNTSIRVLCNANTSEGFNPQKDVTLPEIHLYGGEVNSKLLSPPPDSAPRPYLAFFAGGEHGSIRSTLLHHWKNRDNDIMQVHEYLPKGLDYYSFMLTSKFCLCPSGFEVASPRIVESIYAECVPVILSEHFVLPFSDVLQWDAFSVQINVSDIPRLKEILSAIPESEYWKLKQGVRAVRKHFTLNQPAKRFDVFHMILHSIWLRRLNIQLR* 458
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g3896 457 PANTHER EXOSTOSIN HEPARAN SULFATE GLYCOSYLTRANSFERASE -RELATED 58 455 IPR004263 GO:0006486|GO:0016757
Lja1g3896 457 Pfam Exostosin family 125 408 IPR040911 -
Lja1g3896 457 PANTHER XYLOGALACTURONAN BETA-1,3-XYLOSYLTRANSFERASE 58 455 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g3896 Lja-Chr1 49150845 49155244 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g3896 - - gmx:100820065 661.373
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja1g3896 1 49150845 49155244 Lja1g3896 1 49150845 49155244 ECH