Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g3885 ATGCTATCACCAAACCCACTTTCTCTCTTGTGTGCATTGCTTCTATGCTTGCCTCTTGCCATCTTATACACCACCACGTCCACACCCACCCCCACTTCCACCTCCACCACCACCACCACCGCCGCCACAGCCACCATTCAACCCCAAAACCGCACAAACAATTTCATTCCACCCAACAAATTATCACCTGAAGAGGCCTTGTTCAGAATAGCCGCACGTGCCAAACGGAAAACCACACGTGCGAGAAAACTAGCTTTCATGTTCCTCACCACCACCCCACTTCCATTCGCACCCCTCTGGGAAGCTTACTTCAACCAAACTCCGACCACCCTCTTCAACATCTACATCCACGCCGACCCCACCTTCCACTACCACCCACCCTTCACCGGCGTCTTCTCCAACCGCCTCATCCCATCAAAACCCACCGCCAGAAACTCCCCTACGCTCGCCGCGGCGGCGCGTCGACTCCTCGCACGCGCCCTCATCGACGACTCTTCCAACTACATGTTCCTCCTCCTCTCCCCCTCCTGCATCCCCCTCCACTCCTTCAACTTCACCTACCACACCCTCACCACCTCCGGCAAGAGCTTCATCGAGATTCTAAAAAACGAAACCGGATCATACGACCGGTGGGCGGCGCGTGGAACTCACGCTATGCTCCCCGCGGTGAGGCTTGAGGATTTCCGTATAGGGTCCCAGTTCTGGGCTTTGACACGTAAGCACGCGAGGCTCGTCGTGAGTGACCGCGTGCTGTGGCCGAAGTTCAACGTGCCGTGCGTGCGGTCGGACACGTGTTACCCGGAGGAGAATTACTTCCCTACTCTCCTGAGCATGTGGGACCGGCGCGGGTGCGTCCACGCCACACTCACCCATGTGGCGTGGACGTTCCCGAACGACGGGCACCCTCGCACGTATGAGGCGTCCGAGGTGTGCCCTGAACTAATTCGCACATTGCGGCGTGATAGACCGAGATACGGTGATGATGACGGAGGTGGCAGTGGCAGACGTGATCCGTTTCTGTTTGCGAGGAAATTCGCTCCCGACGCTATTGAACCGTTGATGGGTATAGCAGACGGTGTTATCTTCAGGGACTGA 1095 0.5726 MLSPNPLSLLCALLLCLPLAILYTTTSTPTPTSTSTTTTTAATATIQPQNRTNNFIPPNKLSPEEALFRIAARAKRKTTRARKLAFMFLTTTPLPFAPLWEAYFNQTPTTLFNIYIHADPTFHYHPPFTGVFSNRLIPSKPTARNSPTLAAAARRLLARALIDDSSNYMFLLLSPSCIPLHSFNFTYHTLTTSGKSFIEILKNETGSYDRWAARGTHAMLPAVRLEDFRIGSQFWALTRKHARLVVSDRVLWPKFNVPCVRSDTCYPEENYFPTLLSMWDRRGCVHATLTHVAWTFPNDGHPRTYEASEVCPELIRTLRRDRPRYGDDDGGGSGRRDPFLFARKFAPDAIEPLMGIADGVIFRD* 365
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g3885 364 PANTHER CORE-2/I-BRANCHING ENZYME 2 364 - -
Lja1g3885 364 Pfam Core-2/I-Branching enzyme 84 318 IPR003406 GO:0016020|GO:0016757
Lja1g3885 364 PANTHER CORE-2/I-BRANCHING BETA-1,6-N-ACETYLGLUCOSAMINYLTRANSFERASE FAMILY PROTEIN-RELATED 2 364 IPR044174 GO:0016757
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g3885 Lja-Chr1 48987732 48989144 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g3885 - - gmx:100788566 443.736
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja1g3885 1 48987732 48989144 Lja1g3885 1 48987732 48989144 ECH